RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DNAJB3Q8WWF6 145 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 DEFB118Q96PH6 123 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PHF20Q9BVI0 1012 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PRR23AA6NEV1 266 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 RTN2O75298 545 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 AP1G2O75843 785 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 DDHD2O94830 711 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 TUFMP49411 452 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 PCBP1Q15365 356 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP47-203ENST00000399455 KLHL38Q2WGJ6 581 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 MFSD4BQ5TF39 518 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 OR6P1Q8NGX9 317 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ACER1Q8TDN7 264 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 DDI1Q8WTU0 396 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 NIF3L1Q9GZT8 377 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 SETD4Q9NVD3 440 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 RGS4P49798 205 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 C21orf59P57076 290 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 IL1RL1Q01638 556 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ZNF677Q86XU0 584 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 DCLK3Q9C098 648 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ATXN3LQ9H3M9 355 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 NSMCE4AQ9NXX6 385 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ITGA11Q9UKX5 1188 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 KIAA1257Q9ULG3 409 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 NDUFS3O75489 264 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 KRT38O76015 456 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 OCM2P0CE71 109 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 OCMP0CE72 109 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 PDAP1Q13442 181 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 TOB2Q14106 344 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 ATP8B4Q8TF62 1192 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 MTBPQ96DY7 904 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 EEF2KMTQ96G04 330 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 CPB2Q96IY4 423 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 UBXN6Q9BZV1 441 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 FAM96AQ9H5X1 160 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 TBX20Q9UMR3 447 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PRMT3O60678 531 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 FARP2O94887 1054 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 NMT1P30419 496 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 COPS2P61201 443 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 HIST2H2ACQ16777 129 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 SPDYE7PQ495Y7 208 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 Q4G0T1 1027 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 HIST2H2AA3Q6FI13 130 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PKN3Q6P5Z2 889 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 POTEAQ6S8J7 498 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ACRBPQ8NEB7 543 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PABPC5Q96DU9 382 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 REEP2Q9BRK0 252 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 GAKO14976 1311 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 HNRNPCL2B2RXH8 293 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 HNRNPCL1O60812 293 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 CENPCQ03188 943 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PABPC1LQ4VXU2 614 aaKnown RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 TIGD7Q6NT04 549 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 DNAJC7Q99615 494 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 EXOC1LA0A1B0GW35 172 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 KLRK1P26718 216 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 GCKP35557 465 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 RENBPP51606 427 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 BRD3Q15059 726 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ZNF284Q2VY69 593 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ANKRD20A4Q4UJ75 823 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ANKRD20A8PQ5CZ79 823 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 ANKRD20A2Q5SQ80 823 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 HP1BP3Q5SSJ5 553 aaPredicted RBP8.36□□□□□ -1.07
USP47-203ENST00000399455 ANKRD20A1Q5TYW2 823 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 CLEC10AQ8IUN9 316 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 RCOR2Q8IZ40 523 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PPP1R16AQ96I34 528 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PANX2Q96RD6 677 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 PCDHGB4Q9UN71 923 aa8.36□□□□□ -1.07
USP47-203ENST00000399455 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 TRAV19A0A0A6YYK7 116 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 NPHP3-ACAD11A0A0J9YXS1 232 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 P4HA2O15460 535 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 HSPA4LO95757 839 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 FGBP02675 491 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 ADH1AP07327 375 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 RGS7P49802 495 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 FXR2P51116 673 aaKnown RBP eCLIP8.35□□□□□ -1.073e-11■■■■□ 22.8
USP47-203ENST00000399455 ARHGDIAP52565 204 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 OCRLQ01968 901 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 PGM5Q15124 567 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 TSNAXIP1Q2TAA8 658 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 CCDC144BQ3MJ40 725 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 FNDC3BQ53EP0 1204 aaKnown RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 GJC2Q5T442 439 aaPredicted RBP8.35□□□□□ -1.07
USP47-203ENST00000399455 LLGL2Q6P1M3 1020 aa8.35□□□□□ -1.07
USP47-203ENST00000399455 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms