RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 STAT1P42224 750 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 RAP1GAPP47736 663 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
TNRC18-202ENST00000399434 DEFB103AP81534 67 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 IKBKEQ14164 716 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 MTF1Q14872 753 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 ZNF667Q5HYK9 610 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 NOMO2Q5JPE7 1267 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 CD300LGQ6UXG3 332 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 RAD9BQ6WBX8 426 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 ENOSF1Q7L5Y1 443 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 FAM71AQ8IYT1 594 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 RABGGTAQ92696 567 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 NXF1Q9UBU9 619 aaKnown RBP17.4■□□□□ 0.38
TNRC18-202ENST00000399434 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 ABHD14A-ACY1A0A1B0GW23 586 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 EVI5O60447 810 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 DDHD2O94830 711 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 PFKMP08237 780 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 SYN1P17600 705 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 CLCNKBP51801 687 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 MFAP3P55082 362 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 TUSC3Q13454 348 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 ASIC2Q16515 512 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF280BQ86YH2 543 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 CCDC112Q8NEF3 446 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 SYT11Q9BT88 431 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 NUCKS1Q9H1E3 243 aaKnown RBP17.39■□□□□ 0.37
TNRC18-202ENST00000399434 CNTN6Q9UQ52 1028 aa17.39■□□□□ 0.37
TNRC18-202ENST00000399434 F8W810 466 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 PODXLO00592 558 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 CLSTN1O94985 981 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 TBXAS1P24557 533 aaPredicted RBP17.38■□□□□ 0.37
TNRC18-202ENST00000399434 CLCN1P35523 988 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 PRKCIP41743 596 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF132P52740 706 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 CDK17Q00537 523 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 ARID5AQ03989 594 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 UPP1Q16831 310 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 LIMS2Q7Z4I7 341 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 TMCO2Q7Z6W1 182 aaPredicted RBP17.38■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF560Q96MR9 790 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 RC3H2Q9HBD1 1191 aaKnown RBP17.38■□□□□ 0.37
TNRC18-202ENST00000399434 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 LRFN2Q9ULH4 789 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 ZMYND8Q9ULU4 1186 aaPredicted RBP17.38■□□□□ 0.37
TNRC18-202ENST00000399434 NME7Q9Y5B8 376 aa17.38■□□□□ 0.37
TNRC18-202ENST00000399434 CALCAP01258 141 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 WEE2P0C1S8 567 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 TAF6P49848 677 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 CDH8P55286 799 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 FPGSQ05932 587 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 PPIGQ13427 754 aaKnown RBP eCLIP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 COLGALT2Q8IYK4 626 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 URGCPQ8TCY9 931 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 FAXDC2Q96IV6 333 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 FAM81BQ96LP2 452 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 HTATIP2Q9BUP3 242 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 PRKAG2Q9UGJ0 569 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 HMGXB4Q9UGU5 601 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 CYP26A1O43174 497 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 SERPING1P05155 500 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 ITGB1P05556 798 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 FERP16591 822 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 CD58P19256 250 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 RPL9P32969 192 aaKnown RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■■■ 72.1
TNRC18-202ENST00000399434 LILRA4P59901 499 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 ASTE1Q2TB18 679 aaPredicted RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 CYP26C1Q6V0L0 522 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF571Q7Z3V5 609 aaPredicted RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 TMTC1Q8IUR5 882 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 WHAMMQ8TF30 809 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 SLC20A1Q8WUM9 679 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 TRIM44Q96DX7 344 aaPredicted RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 TWNKQ96RR1 684 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 HAUS4Q9H6D7 363 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 CISHQ9NSE2 258 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 GDAP2Q9NXN4 497 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 DNAJB4Q9UDY4 337 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 NOCTQ9UK39 431 aaKnown RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.37■□□□□ 0.37
TNRC18-202ENST00000399434 SNX9Q9Y5X1 595 aa17.37■□□□□ 0.37
TNRC18-202ENST00000399434 VWA8A3KMH1 1905 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 KPNA7A9QM74 516 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 HOXA2O43364 376 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 DGKIO75912 1065 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 UPP2O95045 317 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 KIF4AO95239 1232 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 EIF4A3P38919 411 aaKnown RBP17.36■□□□□ 0.37
TNRC18-202ENST00000399434 PNPLA4P41247 253 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 TNNC1P63316 161 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 INCA1Q0VD86 236 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
TNRC18-202ENST00000399434 SOWAHAQ2M3V2 549 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms