RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 ADORA2BP29275 332 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 RBP5P82980 135 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 C1orf131Q8NDD1 294 aaKnown RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 AGAP3Q96P47 875 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 SERPINB12Q96P63 405 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 TRIM4Q9C037 500 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
SOCS6-201ENST00000397942 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
SOCS6-201ENST00000397942 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.31
SOCS6-201ENST00000397942 EXTL3O43909 919 aa13.08□□□□□ -0.31
SOCS6-201ENST00000397942 TTC4O95801 387 aa13.08□□□□□ -0.31
SOCS6-201ENST00000397942 PBX1P40424 430 aa13.08□□□□□ -0.31
SOCS6-201ENST00000397942 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.31
SOCS6-201ENST00000397942 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.31
SOCS6-201ENST00000397942 REXO2Q9Y3B8 237 aaKnown RBP13.08□□□□□ -0.31
SOCS6-201ENST00000397942 PMLP29590 882 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 COPS2P61201 443 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 RDM1Q8NG50 284 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 AENQ8WTP8 325 aaKnown RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 SLC40A1Q9NP59 571 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 CCDC22O60826 627 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 PIP4K2CQ8TBX8 421 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 ACSF2Q96CM8 615 aaPredicted RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 BAG5Q9UL15 447 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 COL5A2P05997 1499 aaPredicted RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 CEP120Q8N960 986 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 PGM1P36871 562 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 AMPD2Q01433 879 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 CUL2Q13617 745 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 Q4G0T1 1027 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
SOCS6-201ENST00000397942 OR6P1Q8NGX9 317 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 BAP1Q92560 729 aa13.08□□□□□ -0.32
SOCS6-201ENST00000397942 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 NDUFAF2Q8N183 169 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 TNFRSF25Q93038 417 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 FAM96AQ9H5X1 160 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF200P98182 395 aaPredicted RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 EFHC2Q5JST6 749 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SCN4BQ8IWT1 228 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ARHGEF26Q96DR7 871 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ATXN7L3BQ96GX2 97 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 RSAD1Q9HA92 442 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ARHGEF37A1IGU5 675 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 OGTO15294 1046 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ATP9BO43861 1147 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 RARBP10826 455 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 GARTP22102 1010 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ARPP19P56211 112 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 AP1B1Q10567 949 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 IER5Q5VY09 327 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 ACTL9Q8TC94 416 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 PARD3BQ8TEW8 1205 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SPDL1Q96EA4 605 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 YIPF3Q9GZM5 350 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 MAP3K6O95382 1288 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 PRKCIP41743 596 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 CENPCQ03188 943 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 KCNMA1Q12791 1236 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 TRIM67Q6ZTA4 783 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 C4orf19Q8IY42 314 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SKA2Q8WVK7 121 aaPredicted RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 KAT5Q92993 513 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 GCOM2Q9BZD3 368 aaPredicted RBP13.07□□□□□ -0.32
SOCS6-201ENST00000397942 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 PDGFRBP09619 1106 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 CYB5D1Q6P9G0 228 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
SOCS6-201ENST00000397942 DCCP43146 1447 aa13.06□□□□□ -0.32
SOCS6-201ENST00000397942 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
SOCS6-201ENST00000397942 NME3Q13232 169 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms