RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CDR2Q01850 454 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 MTMR3Q13615 1198 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 PRPSAP1Q14558 356 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 MMS22LQ6ZRQ5 1243 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 SLC30A5Q8TAD4 765 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 PPP1R13LQ8WUF5 828 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 HTATIP2Q9BUP3 242 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 WNT8AQ9H1J5 351 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 RNF186Q9NXI6 227 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 ST3GAL5Q9UNP4 418 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 LAMB2P55268 1798 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 TBKBP1A7MCY6 615 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 SGK1O00141 431 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 POMCP01189 267 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 BMP6P22004 513 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 RGS7P49802 495 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 MTF1Q14872 753 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 GOLGA7BQ2TAP0 167 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 JADE1Q6IE81 842 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 LRRC55Q6ZSA7 311 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 CISHQ9NSE2 258 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 DDX56Q9NY93 547 aaKnown RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 MAGED2Q9UNF1 606 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 LRRIQ3A6PVS8 624 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 TREHO43280 583 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 ECEL1O95672 775 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 TMEM253P0C7T8 217 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 ATP5DP30049 168 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 SSTR3P32745 418 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 ELF2Q15723 593 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 MGAT5BQ3V5L5 792 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 PPP1R14CQ8TAE6 165 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 KRT12Q99456 494 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 SEPT5Q99719 369 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 CWC15Q9P013 229 aaKnown RBP8.77□□□□□ -1.01
PTPRD-204ENST00000397606 INTUQ9ULD6 942 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 PCDHB12Q9Y5F1 795 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 AKAP11Q9UKA4 1901 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CASTOR2A6NHX0 329 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 TISP43B9A030 160 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 F8VZ95 297 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CCDC188H7C350 402 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 DPYSL4O14531 572 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 SPIRE1Q08AE8 756 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 NFE2Q16621 373 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 BSPRYQ5W0U4 402 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF280DQ6N043 979 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 LENG1Q96BZ8 264 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 TSPAN18Q96SJ8 248 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 GAD1Q99259 594 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF518BQ9C0D4 1074 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 KCTD10Q9H3F6 313 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ARHGAP28Q9P2N2 729 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CACNA1SQ13698 1873 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 LGR5O75473 907 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 URODP06132 367 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 GJB1P08034 283 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 PDGFRAP16234 1089 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CCZ1BP86790 482 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CCZ1P86791 482 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 BTG3Q14201 252 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 EFHC1Q5JVL4 640 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 RWDD4Q6NW29 188 aaKnown RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ARFGAP2Q8N6H7 521 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 PCSK1NQ9UHG2 260 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 MAST2Q6P0Q8 1798 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ARIH2O95376 493 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ARF4P18085 180 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 PAX3P23760 479 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CD52P31358 61 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 GJA5P36382 358 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ALDH1A3P47895 512 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 SP2Q02086 613 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 DARS2Q6PI48 645 aaKnown RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 C17orf99Q6UX52 265 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 MS4A4AQ96JQ5 239 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 C2CD2Q9Y426 696 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 FGGP02679 453 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 CYP11B1P15538 503 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 GRM5P41594 1212 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 PPM1FP49593 454 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ACLYP53396 1101 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 PIGHQ14442 188 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 AMHR2Q16671 573 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 LGSNQ5TDP6 509 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 MAMDC4Q6UXC1 1216 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 ACOT1Q86TX2 421 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 TIAM2Q8IVF5 1701 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 TMEM176AQ96HP8 235 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 SLITRK1Q96PX8 696 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 HIPK3Q9H422 1215 aa8.76□□□□□ -1.01
PTPRD-204ENST00000397606 BARX2Q9UMQ3 279 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-204ENST00000397606 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
PTPRD-204ENST00000397606 SELPP16109 830 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms