RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 HTRA4P83105 476 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 LRMPQ12912 555 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 CACNA2D4Q7Z3S7 1137 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 RNF169Q8NCN4 708 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 HELQQ8TDG4 1101 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 TATDN2Q93075 761 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 ELMO3Q96BJ8 720 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 NT5C1BQ96P26 610 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 PANX2Q96RD6 677 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 DNAJC7Q99615 494 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 XYLT2Q9H1B5 865 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 APOBEC3GQ9HC16 384 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.514e-7■■■■■ 121.4
TSPAN4-205ENST00000397406 ABHD10Q9NUJ1 306 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 MUC3AQ02505 3323 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 CYP3A5P20815 502 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 JAM2P57087 298 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 SOX4Q06945 474 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 TRPC3Q13507 836 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 NAB2Q15742 525 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 SPOPLQ6IQ16 392 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 ZNF397Q8NF99 534 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 BEST2Q8NFU1 509 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 OR8K1Q8NGG5 319 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 KCNF1Q9H3M0 494 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 ELAC1Q9H777 363 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 TMEM161AQ9NX61 479 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 DNAJC12Q9UKB3 198 aa18.21■□□□□ 0.51
TSPAN4-205ENST00000397406 MYO9BQ13459 2157 aa18.21■□□□□ 0.5
TSPAN4-205ENST00000397406 CUL9Q8IWT3 2517 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 LRRC53A6NM62 1247 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 EFCAB14O75071 495 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 OFD1O75665 1012 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 KRT19P08727 400 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 FECHP22830 423 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 POLR2BP30876 1174 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 ERVK-21P61565 698 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 NOP14P78316 857 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 SGSM1Q2NKQ1 1148 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 WDR44Q5JSH3 913 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 RRAGAQ7L523 313 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 CRIPAKQ8N1N5 446 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 KREMEN1Q96MU8 473 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 RPS6KC1Q96S38 1066 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 ZBED2Q9BTP6 218 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 GPR88Q9GZN0 384 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 MYO6Q9UM54 1294 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 AGAP1Q9UPQ3 857 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
TSPAN4-205ENST00000397406 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 THP07101 528 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 HNRNPH3P31942 346 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 SCNN1GP51170 649 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 RBP5P82980 135 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 GCNT1Q02742 428 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 RAPGEF1Q13905 1077 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 CLLU1OSQ5K130 101 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 E4F1Q66K89 784 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 TMEM139Q8IV31 216 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 PPM1KQ8N3J5 372 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 TAF4BQ92750 862 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 KAT5Q92993 513 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 STK33Q9BYT3 514 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 VRTNQ9H8Y1 702 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
TSPAN4-205ENST00000397406 STAU1O95793 577 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 LINC00271P0C7V0 271 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 LRPAP1P30533 357 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 ATICP31939 592 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 CCZ1BP86790 482 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 CCZ1P86791 482 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 MEA1Q16626 185 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 HS1BP3Q53T59 392 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 C9orf57Q5W0N0 161 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 WDR59Q6PJI9 974 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 FAM81BQ96LP2 452 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 SPAG5Q96R06 1193 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 NUCKS1Q9H1E3 243 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 SLC38A7Q9NVC3 462 aa18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 PRRC2BQ5JSZ5 2229 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-205ENST00000397406 F8VZ95 297 aa18.17■□□□□ 0.5
TSPAN4-205ENST00000397406 PIRO00625 290 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms