RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 TTC3P53804 2025 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-202ENST00000397386 NDUFA10O95299 355 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 LCA5LO95447 670 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 FAM163BP0C2L3 166 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 SCNN1GP51170 649 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 GUCY2FP51841 1108 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 TUSC3Q13454 348 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-202ENST00000397386 TDRD12Q587J7 1177 aaKnown RBP13.58□□□□□ -0.24
LMCD1-202ENST00000397386 RAD9BQ6WBX8 426 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 URGCPQ8TCY9 931 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 ARID3AQ99856 593 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 HAUS4Q9H6D7 363 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-202ENST00000397386 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 GDAP2Q9NXN4 497 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 SCN5AQ14524 2016 aa13.58□□□□□ -0.24
LMCD1-202ENST00000397386 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 CCP110O43303 1012 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 CLSTN1O94985 981 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 MSNP26038 577 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 CLCN1P35523 988 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 EIF4A3P38919 411 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 TAF6P49848 677 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 AFF1P51825 1210 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 TNNC1P63316 161 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 ARID5AQ03989 594 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 PTK2Q05397 1052 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 SV2CQ496J9 727 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 CLLU1OSQ5K130 101 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 DPH6Q7L8W6 267 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 NPAS4Q8IUM7 802 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 CISHQ9NSE2 258 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
LMCD1-202ENST00000397386 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
LMCD1-202ENST00000397386 KPNA7A9QM74 516 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 ESPNB1AK53 854 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 CYP26A1O43174 497 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 AKR1B10O60218 316 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
LMCD1-202ENST00000397386 PLEKP08567 350 aaPredicted RBP13.56□□□□□ -0.24
LMCD1-202ENST00000397386 CCDC175P0C221 793 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 ITGB8P26012 769 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 KIF11P52732 1056 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 ZNF132P52740 706 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 KRT83P78385 493 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 DSC1Q08554 894 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 INCA1Q0VD86 236 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
LMCD1-202ENST00000397386 TCTN1Q2MV58 587 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 LIMS2Q7Z4I7 341 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 EPS8L1Q8TE68 723 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
LMCD1-202ENST00000397386 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 RNF19AQ9NV58 838 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
LMCD1-202ENST00000397386 PPEF2O14830 753 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 ZSCAN12O43309 604 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 POMCP01189 267 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 PNMA6AP0CW24 399 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-202ENST00000397386 KRT5P13647 590 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 CSF2RAP15509 400 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 USP8P40818 1118 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 PDE6CP51160 858 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 LILRA4P59901 499 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 MTF1Q14872 753 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 SLC18A3Q16572 532 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 UPP1Q16831 310 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 ZNF571Q7Z3V5 609 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-202ENST00000397386 ABI1Q8IZP0 508 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 ELMO3Q96BJ8 720 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 HTATIP2Q9BUP3 242 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 GOLGA2P5Q9HBQ8 144 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 IL23AQ9NPF7 189 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 NOCTQ9UK39 431 aaKnown RBP13.55□□□□□ -0.24
LMCD1-202ENST00000397386 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 ADGRG1Q9Y653 693 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 SCN1AP35498 2009 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
LMCD1-202ENST00000397386 PODXLO00592 558 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TACC1O75410 805 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 PAEPP09466 180 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 FGFR1P11362 822 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CYP11B1P15538 503 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms