RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 BMP3P12645 472 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 KRT5P13647 590 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 MOGSQ13724 837 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 MYBPC3Q14896 1274 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 WASHC2DQ5SRD0 308 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 C1orf220Q5T0J3 134 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 TRABD2AQ86V40 505 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 RIBC1Q8N443 379 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 CERS5Q8N5B7 392 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 PLEKHO2Q8TD55 490 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 SLC7A6OSQ96CW6 309 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 RBM17Q96I25 401 aaKnown RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 GALNT8Q9NY28 637 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 KCND2Q9NZV8 630 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 NVLO15381 856 aaKnown RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 GDF11O95390 407 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 CALCAP01258 141 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 DEUP1Q05D60 604 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 NR1H3Q13133 447 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 TAF1BQ53T94 588 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 RASIP1Q5U651 963 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 DAB2IPQ5VWQ8 1189 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 PRR5LQ6MZQ0 368 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 DAW1Q8N136 415 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 ZFAND2BQ8WV99 257 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 SHC3Q92529 594 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 DHX38Q92620 1227 aaKnown RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 ZNF577Q9BSK1 485 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 VCXQ9H320 206 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 UNC45AQ9H3U1 944 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 DENND2DQ9H6A0 471 aaPredicted RBP9.71□□□□□ -0.86
CAPN3-206ENST00000397163 ZFP69BQ9UJL9 534 aa9.71□□□□□ -0.86
CAPN3-206ENST00000397163 TNS1Q9HBL0 1735 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 MAGEB2O15479 319 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 EDF1O60869 148 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 T-ENOLP0DO92 83 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 CCNFP41002 786 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 CENPCQ03188 943 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 PKN2Q16513 984 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 P3H1Q32P28 736 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 TRAPPC3LQ5T215 181 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 TRMT1LQ7Z2T5 733 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 SEMA4DQ92854 862 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 GBP5Q96PP8 586 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 PLEKHG4BQ96PX9 1271 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 VPS37BQ9H9H4 285 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 KIAA1586Q9HCI6 787 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 PKD2L1Q9P0L9 805 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 RPA3P35244 121 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 MCL1Q07820 350 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 PDK4Q16654 411 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 C2CD6Q53TS8 623 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 C10orf82Q8WW14 230 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 NT5C1BQ96P26 610 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 STRA6Q9BX79 667 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 UBN1Q9NPG3 1134 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 EURLQ9NYK6 297 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 SMG5Q9UPR3 1016 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 EP400Q96L91 3159 aa9.7□□□□□ -0.86
CAPN3-206ENST00000397163 TNRC6CQ9HCJ0 1690 aaKnown RBP9.7□□□□□ -0.86
CAPN3-206ENST00000397163 PLS3P13797 630 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 MARK3P27448 753 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 PTPN4P29074 926 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SEPT7Q16181 437 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 NLRP9Q7RTR0 991 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SIAH1Q8IUQ4 282 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ENDOVQ8N8Q3 282 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 DENND1AQ8TEH3 1009 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 TEKT1Q969V4 418 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 NPHS2Q9NP85 383 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 WDR91A4D1P6 747 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 HNRNPRO43390 633 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 BBOX1O75936 387 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ADRB2P07550 413 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ABHD2P08910 425 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ARP10275 920 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ACADSP16219 412 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 ADRA2BP18089 450 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 RCN1Q15293 331 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 SLC1A5Q15758 541 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CCNG2Q16589 344 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CLEC16AQ2KHT3 1053 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 KHDC1Q4VXA5 237 aaKnown RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 CEP55Q53EZ4 464 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 EAPPQ56P03 285 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-206ENST00000397163 PCNX4Q63HM2 1172 aa9.69□□□□□ -0.86
CAPN3-206ENST00000397163 APOBEC3HQ6NTF7 200 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms