RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ARHGAP28Q9P2N2 729 aa16.67■□□□□ 0.26
HOXA3-202ENST00000396352 NFASCO94856 1347 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-202ENST00000396352 MAGEA4P43358 317 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 ACVR2BQ13705 512 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 PSMD6Q15008 389 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 ECHDC2Q86YB7 292 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-202ENST00000396352 BICD1Q96G01 975 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 TRIM33Q9UPN9 1127 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 A8MUI8 341 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 EXTL3O43909 919 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 CCNB1P14635 433 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 PPP1R21Q6ZMI0 780 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 LPAR1Q92633 364 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 PRCCQ92733 491 aaPredicted RBP16.66■□□□□ 0.26
HOXA3-202ENST00000396352 APOBEC3GQ9HC16 384 aaKnown RBP16.66■□□□□ 0.26
HOXA3-202ENST00000396352 ADAM22Q9P0K1 906 aa16.66■□□□□ 0.26
HOXA3-202ENST00000396352 RASA4BC9J798 803 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 RASA4O43374 803 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 POTEJP0CG39 1038 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 PIK3CAP42336 1068 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 RTP1P59025 263 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 TMED2Q15363 201 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 WDR44Q5JSH3 913 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 LIN9Q5TKA1 542 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 ARHGEF16Q5VV41 709 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 PHF13Q86YI8 300 aaPredicted RBP16.65■□□□□ 0.26
HOXA3-202ENST00000396352 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 RIBC1Q8N443 379 aaPredicted RBP16.65■□□□□ 0.26
HOXA3-202ENST00000396352 GJC1P36383 396 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 NLRP11P59045 1033 aaKnown RBP16.65■□□□□ 0.26
HOXA3-202ENST00000396352 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
HOXA3-202ENST00000396352 KLHL11Q9NVR0 708 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 FAM47DPA6NHR8 397 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 PLSCR1O15162 318 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 LIASO43766 372 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 TCF4P15884 667 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 PDE4CQ08493 712 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 CCDC15Q0P6D6 951 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 CUL2Q13617 745 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 CCDC142Q17RM4 750 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 TRIM72Q6ZMU5 477 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 TRABD2AQ86V40 505 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 VCPIP1Q96JH7 1222 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 HAPLN2Q9GZV7 340 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 MRPL47Q9HD33 250 aaKnown RBP16.65■□□□□ 0.26
HOXA3-202ENST00000396352 USTQ9Y2C2 406 aa16.65■□□□□ 0.26
HOXA3-202ENST00000396352 ASMTLO95671 621 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 FOXP3Q9BZS1 431 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 KIAA1683Q9H0B3 1180 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 TLR3O15455 904 aaKnown RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 DGAT1O75907 488 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 TNNI1P19237 187 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 GNA15P30679 374 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 NFX1Q12986 1120 aaKnown RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 ATP13A4Q4VNC1 1196 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 LARGE2Q8N3Y3 721 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 DENND1AQ8TEH3 1009 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 DNPEPQ9ULA0 475 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 COL11A1P12107 1806 aaPredicted RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 DNALI1O14645 258 aaPredicted RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 ANP32DO95626 131 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 KRT10P13645 584 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 KCNA2P16389 499 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 SKIV2L2P42285 1042 aaKnown RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 ACOT2P49753 483 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 IL9RQ01113 521 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 TMEM270Q6UE05 265 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 FAM47EQ6ZV65 393 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 IFT74Q96LB3 600 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 PITPNM3Q9BZ71 974 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 POLR3FQ9H1D9 316 aaPredicted RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 SAYSD1Q9NPB0 183 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
HOXA3-202ENST00000396352 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 C15orf41Q9Y2V0 281 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 SCINQ9Y6U3 715 aa16.64■□□□□ 0.25
HOXA3-202ENST00000396352 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 MAGEB2O15479 319 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 ZSCAN5DPP0CG00 497 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 MSH2P43246 934 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 FASTKD3Q14CZ7 662 aaKnown RBP16.63■□□□□ 0.25
HOXA3-202ENST00000396352 VSIG10LQ86VR7 867 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 MTMR14Q8NCE2 650 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 NSMCE1Q8WV22 266 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
HOXA3-202ENST00000396352 CFAP57Q96MR6 1250 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms