RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 RECQL4O94761 1208 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 CD4P01730 458 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 CYP1A2P05177 515 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 PAEPP09466 180 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 SLC35G2Q8TBE7 412 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 HPDLQ96IR7 371 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 TLR10Q9BXR5 811 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 SNX12Q9UMY4 172 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 IPPQ9Y573 584 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 SMIM28A0A1B0GU29 152 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 EFCAB8A8MWE9 144 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 PIRO00625 290 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 BUB1O43683 1085 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 PALMO75781 387 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 MYBL1P10243 752 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 GNA15P30679 374 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 CDH5P33151 784 aaPredicted RBP12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 CENPCQ03188 943 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 DSC3Q14574 896 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 WDR72Q3MJ13 1102 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 TAF3Q5VWG9 929 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 SYCE1Q8N0S2 351 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 TRIM11Q96F44 468 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF518BQ9C0D4 1074 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 PCDHGC3Q9UN70 934 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 PTPN22Q9Y2R2 807 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
GTF2A2-202ENST00000396060 A0A0U1RQG5 324 aaPredicted RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 CES2O00748 559 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 ENC1O14682 589 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 CILPO75339 1184 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 TADA3O75528 432 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 KRT19P08727 400 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 WEE2P0C1S8 567 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 THPOP40225 353 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 CDK7P50613 346 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 RAB27AP51159 221 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 NAP1L1P55209 391 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 LIMS2Q7Z4I7 341 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 PHF13Q86YI8 300 aaPredicted RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 WHAMMQ8TF30 809 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 CARD6Q9BX69 1037 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 THAP2Q9H0W7 228 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 SEPT11Q9NVA2 429 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 UVRAGQ9P2Y5 699 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 RNF14Q9UBS8 474 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 HES2Q9Y543 173 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 TMCO5BA8MYB1 307 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 ARVCFO00192 962 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 LRPAP1P30533 357 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 PNPLA4P41247 253 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 NOP2P46087 812 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 NOMO3P69849 1222 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 ITIH3Q06033 890 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 LPIN1Q14693 890 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 TWF2Q6IBS0 349 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 TRAF7Q6Q0C0 670 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 MCOLN2Q8IZK6 566 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 ARHGEF26Q96DR7 871 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 SDCBP2Q9H190 292 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 CXCL16Q9H2A7 254 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 LHX5Q9H2C1 402 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 FAM105AQ9NUU6 356 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 GDAP2Q9NXN4 497 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
GTF2A2-202ENST00000396060 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms