RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PCDHB8Q9UN66 801 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 FRMD4BQ9Y2L6 1034 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 VWA8A3KMH1 1905 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
CXCL1-201ENST00000395761 TNNC2P02585 160 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 KRT19P08727 400 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 CCNE1P24864 410 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 NDUFV1P49821 464 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 CLCN4P51793 760 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 STIM1Q13586 685 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 CLUL1Q15846 466 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 VARS2Q5ST30 1063 aaKnown RBP17.86■□□□□ 0.45
CXCL1-201ENST00000395761 RSPO2Q6UXX9 243 aaPredicted RBP17.86■□□□□ 0.45
CXCL1-201ENST00000395761 DSTYKQ6XUX3 929 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 TMEM184AQ6ZMB5 413 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 TRAPPC11Q7Z392 1133 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 PALB2Q86YC2 1186 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.86■□□□□ 0.45
CXCL1-201ENST00000395761 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 TSG101Q99816 390 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.86■□□□□ 0.45
CXCL1-201ENST00000395761 ITGA11Q9UKX5 1188 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 BRWD1Q9NSI6 2320 aa17.86■□□□□ 0.45
CXCL1-201ENST00000395761 PSMA7O14818 248 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 MAPK13O15264 365 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 ADH1AP07327 375 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 SPATA31D3P0C874 917 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 TAF6P49848 677 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 CLDN10P78369 228 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 RBP5P82980 135 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 MRPL58Q14197 206 aaKnown RBP17.85■□□□□ 0.45
CXCL1-201ENST00000395761 C1orf220Q5T0J3 134 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 SPATA31D4Q6ZUB0 917 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 ANKS3Q6ZW76 656 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 ZC3H3Q8IXZ2 948 aaKnown RBP17.85■□□□□ 0.45
CXCL1-201ENST00000395761 FAM186BQ8IYM0 893 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 NELFBQ8WX92 580 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 MSLNLQ96KJ4 702 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 DUSP9Q99956 384 aaKnown RBP17.85■□□□□ 0.45
CXCL1-201ENST00000395761 MTRRQ9UBK8 725 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 CTNND2Q9UQB3 1225 aa17.85■□□□□ 0.45
CXCL1-201ENST00000395761 KPNA7A9QM74 516 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 CYB561D2O14569 222 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 CETN3O15182 167 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 TGM5O43548 720 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 TBC1D4O60343 1298 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 CST3P01034 146 aaPredicted RBP17.84■□□□□ 0.45
CXCL1-201ENST00000395761 OR1D2P34982 312 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 PSMC2P35998 433 aaKnown RBP17.84■□□□□ 0.45
CXCL1-201ENST00000395761 KCNQ1P51787 676 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 STX17P56962 302 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 LRRC63Q05C16 580 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 LEXMQ3ZCV2 418 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 ANKRD54Q6NXT1 300 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 PDXDC1Q6P996 788 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 PPFIBP1Q86W92 1011 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.84■□□□□ 0.45
CXCL1-201ENST00000395761 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 BACE2Q9Y5Z0 518 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 CDY1Q9Y6F8 540 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 SCN1AP35498 2009 aa17.84■□□□□ 0.45
CXCL1-201ENST00000395761 XIRP2A4UGR9 3374 aa17.83■□□□□ 0.45
CXCL1-201ENST00000395761 FSD2A1L4K1 749 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 TRIM49P0CI25 452 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 TRIM49CP0CI26 452 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 TYMPP19971 482 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 PAX3P23760 479 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 PPP1R2P41236 205 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 VAMP7P51809 220 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 MRPS5P82675 430 aaKnown RBP17.83■□□□□ 0.44
CXCL1-201ENST00000395761 FKBP3Q00688 224 aaKnown RBP17.83■□□□□ 0.44
CXCL1-201ENST00000395761 CREMQ03060 361 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 BFSP1Q12934 665 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 SV2CQ496J9 727 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 CTXN3Q4LDR2 81 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 TTI2Q6NXR4 508 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 LILRA6Q6PI73 481 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 SYCE2Q6PIF2 218 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 LRRC52Q8N7C0 313 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 C12orf76Q8N812 135 aaPredicted RBP17.83■□□□□ 0.44
CXCL1-201ENST00000395761 FEZF2Q8TBJ5 459 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 ATXN2LQ8WWM7 1075 aaKnown RBP17.83■□□□□ 0.44
CXCL1-201ENST00000395761 CASP10Q92851 521 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 ZNF560Q96MR9 790 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 ASB2Q96Q27 587 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 APOL5Q9BWW9 433 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 FBXL5Q9UKA1 691 aa17.83■□□□□ 0.44
CXCL1-201ENST00000395761 H7C4K7 107 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 OAZ2O95190 189 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 GLUD1P00367 558 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 C4BPAP04003 597 aaKnown RBP17.82■□□□□ 0.44
CXCL1-201ENST00000395761 ODC1P11926 461 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 PNPLA4P41247 253 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 YWHAHQ04917 246 aaPredicted RBP17.82■□□□□ 0.44
CXCL1-201ENST00000395761 PAK1Q13153 545 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 TDRD10Q5VZ19 366 aaKnown RBP17.82■□□□□ 0.44
CXCL1-201ENST00000395761 WSCD1Q658N2 575 aa17.82■□□□□ 0.44
CXCL1-201ENST00000395761 INTS8Q75QN2 995 aaKnown RBP17.82■□□□□ 0.44
CXCL1-201ENST00000395761 USP37Q86T82 979 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 523.6 ms