RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CLTAP09496 248 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 HARSP12081 509 aaKnown RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 MLF2Q15773 248 aaPredicted RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 ZBTB6Q15916 424 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 GRASPQ7Z6J2 395 aaPredicted RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 MYCT1Q8N699 235 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 SUSD3Q96L08 255 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 DDX23Q9BUQ8 820 aaKnown RBP14.75□□□□□ -0.05
SCAF11-203ENST00000395453 EPC1Q9H2F5 836 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 PARVGQ9HBI0 331 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 ANKFY1Q9P2R3 1169 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 TBX20Q9UMR3 447 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 USP18Q9UMW8 372 aa14.75□□□□□ -0.05
SCAF11-203ENST00000395453 DCDC2BA2VCK2 349 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 FAM170BA6NMN3 283 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 CCL16O15467 120 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 ADRB1P08588 477 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 SYT1P21579 422 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 FSHRP23945 695 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 GTF2BQ00403 316 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 RESTQ13127 1097 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 SLC44A4Q53GD3 710 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 USP49Q70CQ1 688 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 ST13P5Q8NFI4 369 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 ZNF461Q8TAF7 563 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 SLC7A14Q8TBB6 771 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 LARP4BQ92615 738 aaKnown RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 FGF14Q92915 247 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
SCAF11-203ENST00000395453 RPP25Q9BUL9 199 aaKnown RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 MORC2Q9Y6X9 1032 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-203ENST00000395453 A0A0B4J269 797 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 TRAK2O60296 914 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 LILRB5O75023 590 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 XYLBO75191 536 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 FAM13AO94988 1023 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 CXCL8P10145 99 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 CYP3A5P20815 502 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 LRPAP1P30533 357 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 NTHL1P78549 312 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 PFKPQ01813 784 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 KYAT1Q16773 422 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 ZBTB41Q5SVQ8 909 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 PARM1Q6UWI2 310 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 MTSS1LQ765P7 747 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 NELL1Q92832 810 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 BICD1Q96G01 975 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 TSPAN18Q96SJ8 248 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 ST6GALNAC4Q9H4F1 302 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 DNMT3BQ9UBC3 853 aaKnown RBP14.73□□□□□ -0.05
SCAF11-203ENST00000395453 GMEB2Q9UKD1 530 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
SCAF11-203ENST00000395453 MTF2Q9Y483 593 aaPredicted RBP14.73□□□□□ -0.05
SCAF11-203ENST00000395453 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.73□□□□□ -0.05
SCAF11-203ENST00000395453 ARHGEF37A1IGU5 675 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 WDR27A2RRH5 827 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 LACTBL1A8MY62 500 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 H7C4K7 107 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 HNRNPDLO14979 420 aaKnown RBP14.72□□□□□ -0.05
SCAF11-203ENST00000395453 OGTO15294 1046 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 NCAM2O15394 837 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 ATF2P15336 505 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 TGM1P22735 817 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 MARCKSP29966 332 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-203ENST00000395453 ABCD1P33897 745 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 TNFSF9P41273 254 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 LIG4P49917 911 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 ROR1Q01973 937 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
SCAF11-203ENST00000395453 ENOX2Q16206 610 aaKnown RBP14.72□□□□□ -0.05
SCAF11-203ENST00000395453 SLC39A4Q6P5W5 647 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 CHAMP1Q96JM3 812 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 NELL2Q99435 816 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 LTB4R2Q9NPC1 389 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 AVENQ9NQS1 362 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-203ENST00000395453 HCFC1R1Q9NWW0 138 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 TUBGCP4Q9UGJ1 667 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 NUB1Q9Y5A7 615 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 USP24Q9UPU5 2620 aa14.72□□□□□ -0.05
SCAF11-203ENST00000395453 K7ENM7 598 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 M0QZQ0 153 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 KRT18P05783 430 aaKnown RBP14.71□□□□□ -0.05
SCAF11-203ENST00000395453 NMT1P30419 496 aaKnown RBP14.71□□□□□ -0.05
SCAF11-203ENST00000395453 MATR3P43243 847 aaKnown RBP eCLIP14.71□□□□□ -0.053e-6■■□□□ 12.9
SCAF11-203ENST00000395453 AARSP49588 968 aaKnown RBP eCLIP14.71□□□□□ -0.05
SCAF11-203ENST00000395453 TPGS2Q68CL5 300 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 FAM173BQ6P4H8 233 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 MAP4K3Q8IVH8 894 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 TCEAL8Q8IYN2 117 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 TMEM130Q8N3G9 435 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 APPL2Q8NEU8 664 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 RASSF8Q8NHQ8 419 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 ITFG1Q8TB96 612 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 DDX12PQ92771 950 aa14.71□□□□□ -0.05
SCAF11-203ENST00000395453 FGF13Q92913 245 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms