RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PTPRAP18433 802 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 IVDP26440 423 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 RNF220Q5VTB9 566 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 CEP120Q8N960 986 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 EPS8L3Q8TE67 593 aaKnown RBP16.51■□□□□ 0.23
PTBP1-204ENST00000394601 NT5C1BQ96P26 610 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 CYP26B1Q9NR63 512 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
PTBP1-204ENST00000394601 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 SH3BP1Q9Y3L3 701 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 PCNTO95613 3336 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 SPATA31C2B4DYI2 1134 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 CYP1A1P04798 512 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-204ENST00000394601 FDX1P10109 184 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 DSG3P32926 999 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 KCNJ1P48048 391 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 PAPOLAP51003 745 aaKnown RBP16.51■□□□□ 0.23
PTBP1-204ENST00000394601 EIF3BP55884 814 aaKnown RBP16.51■□□□□ 0.23
PTBP1-204ENST00000394601 FSTL1Q12841 308 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 POMGNT1Q8WZA1 660 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 NEU2Q9Y3R4 380 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
PTBP1-204ENST00000394601 PODXLO00592 558 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ATP2A1O14983 1001 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 DGAT1O75907 488 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ABL2P42684 1182 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PDE6CP51160 858 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 SLC29A2Q14542 456 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 TDRD10Q5VZ19 366 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 MCOLN2Q8IZK6 566 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PGM2Q96G03 612 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PTPRFP10586 1907 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 CREB1P16220 341 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PECAM1P16284 738 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 OAZ1P54368 228 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ACTR2P61160 394 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 PRKCEQ02156 737 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 SNRNP48Q6IEG0 339 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 FAM213AQ9BRX8 229 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 TMEM109Q9BVC6 243 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 CNOT7Q9UIV1 285 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 UMODL1Q5DID0 1318 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ZC3H11AO75152 810 aaKnown RBP eCLIP16.5■□□□□ 0.239e-7■■□□□ 14.3
PTBP1-204ENST00000394601 SMNDC1O75940 238 aaKnown RBP eCLIP16.5■□□□□ 0.238e-7■■■□□ 16.3
PTBP1-204ENST00000394601 ATG7O95352 703 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 DLATP10515 647 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 YY1P25490 414 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 MMP13P45452 471 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 NLRP11P59045 1033 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 TNFAIP1Q13829 316 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ZACNQ401N2 412 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 ANKS1BQ7Z6G8 1248 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 VSIG1Q86XK7 387 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 SCYL3Q8IZE3 742 aa16.5■□□□□ 0.23
PTBP1-204ENST00000394601 APOBEC3GQ9HC16 384 aaKnown RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-204ENST00000394601 KLHL33A6NCF5 533 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 O00370 1275 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 RFC5P40937 340 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 DENND2CQ68D51 928 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 TMEM154Q6P9G4 183 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 MON1BQ7L1V2 547 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 ATXN2LQ8WWM7 1075 aaKnown RBP16.49■□□□□ 0.23
PTBP1-204ENST00000394601 DDX27Q96GQ7 796 aaKnown RBP16.49■□□□□ 0.23
PTBP1-204ENST00000394601 NAF1Q96HR8 494 aaKnown RBP16.49■□□□□ 0.23
PTBP1-204ENST00000394601 MGAMO43451 1857 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 CLDN3O15551 220 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 VPS41P49754 854 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 PTP4A2Q12974 167 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 PSMD6Q15008 389 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 LMBRD2Q68DH5 695 aaPredicted RBP16.49■□□□□ 0.23
PTBP1-204ENST00000394601 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 TRIM4Q9C037 500 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 MAFBQ9Y5Q3 323 aaPredicted RBP16.49■□□□□ 0.23
PTBP1-204ENST00000394601 ADGRA2Q96PE1 1338 aa16.49■□□□□ 0.23
PTBP1-204ENST00000394601 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 RIPK2O43353 540 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 EXTL3O43909 919 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 ACSL3O95573 720 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CENPCQ03188 943 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 KLF1Q13351 362 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CCDC6Q16204 474 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 ERMARDQ5T6L9 678 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 SEL1L2Q5TEA6 688 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 DAB2IPQ5VWQ8 1189 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 ZNF317Q96PQ6 595 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 TMEM165Q9HC07 324 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 SLC9A2Q9UBY0 812 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms