RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 MEIS3P2A8K0S8 358 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 MMEP08473 750 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 ZNF569Q5MCW4 686 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 TAF3Q5VWG9 929 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 SCARA5Q6ZMJ2 495 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 HACE1Q8IYU2 909 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 RBBP8NLQ8NC74 664 aaPredicted RBP21.74■■□□□ 1.07
HDDC3-202ENST00000394272 PCDHB18PQ96TA0 734 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 RNF19AQ9NV58 838 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 SALL4Q9UJQ4 1053 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 INTUQ9ULD6 942 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 R3HCC1Q9Y3T6 440 aaKnown RBP21.74■■□□□ 1.07
HDDC3-202ENST00000394272 PAXBP1Q9Y5B6 917 aa21.74■■□□□ 1.07
HDDC3-202ENST00000394272 PTGESO14684 152 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 WEE2P0C1S8 567 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 ITGA4P13612 1032 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 RAB27AP51159 221 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 ZNF677Q86XU0 584 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 DNAAF5Q86Y56 855 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 ARMC5Q96C12 935 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 SEPT11Q9NVA2 429 aaKnown RBP21.73■■□□□ 1.07
HDDC3-202ENST00000394272 TAS2R14Q9NYV8 317 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 A0A0U1RQF3 1178 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 ANO9A1A5B4 782 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 MACROD2A1Z1Q3 448 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 BTNL10A8MVZ5 291 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 XPOTO43592 962 aaKnown RBP21.73■■□□□ 1.07
HDDC3-202ENST00000394272 H2AFZP0C0S5 128 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 CYP3A5P20815 502 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 H2AFVQ71UI9 128 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 SLC35F6Q8N357 371 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 LRRC52Q8N7C0 313 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 GSTCDQ8NEC7 633 aa21.73■■□□□ 1.07
HDDC3-202ENST00000394272 SECISBP2LQ93073 1101 aaKnown RBP21.73■■□□□ 1.07
HDDC3-202ENST00000394272 PPEF2O14830 753 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 CALCAP01258 141 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 GZMAP12544 262 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 SELPP16109 830 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 CD58P19256 250 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 YWHAEP62258 255 aaKnown RBP21.72■■□□□ 1.07
HDDC3-202ENST00000394272 C9orf57Q5W0N0 161 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 LRRC8DQ7L1W4 858 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 ZFP42Q96MM3 310 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 PPP1R10Q96QC0 940 aaKnown RBP21.72■■□□□ 1.07
HDDC3-202ENST00000394272 ADAM2Q99965 735 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 SDCBP2Q9H190 292 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 ISCUQ9H1K1 167 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 CYP3A43Q9HB55 503 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 GIT1Q9Y2X7 761 aa21.72■■□□□ 1.07
HDDC3-202ENST00000394272 PIRO00625 290 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 P4HA1P13674 534 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 ATF7P17544 494 aaPredicted RBP21.71■■□□□ 1.07
HDDC3-202ENST00000394272 GNA15P30679 374 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 SOX4Q06945 474 aaPredicted RBP21.71■■□□□ 1.07
HDDC3-202ENST00000394272 BFSP2Q13515 415 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 AGMOQ6ZNB7 445 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 RNF10Q8N5U6 811 aaKnown RBP21.71■■□□□ 1.07
HDDC3-202ENST00000394272 LPPQ93052 612 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 SMYD3Q9H7B4 428 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 TMCO5BA8MYB1 307 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 CASQ1P31415 396 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 MLH1P40692 756 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 RAP1GAPP47736 663 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 GALCP54803 685 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 MYO1EQ12965 1108 aa21.71■■□□□ 1.07
HDDC3-202ENST00000394272 FAM124BQ9H5Z6 455 aaPredicted RBP21.71■■□□□ 1.07
HDDC3-202ENST00000394272 PITPNM1O00562 1244 aa21.7■■□□□ 1.06
HDDC3-202ENST00000394272 TLR3O15455 904 aaKnown RBP21.7■■□□□ 1.06
HDDC3-202ENST00000394272 CDH8P55286 799 aa21.7■■□□□ 1.06
HDDC3-202ENST00000394272 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
HDDC3-202ENST00000394272 ANKRD33Q7Z3H0 272 aa21.7■■□□□ 1.06
HDDC3-202ENST00000394272 GAD1Q99259 594 aa21.7■■□□□ 1.06
HDDC3-202ENST00000394272 CAPN6Q9Y6Q1 641 aa21.7■■□□□ 1.06
HDDC3-202ENST00000394272 RTN2O75298 545 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 TFRCP02786 760 aaKnown RBP21.69■■□□□ 1.06
HDDC3-202ENST00000394272 LRPAP1P30533 357 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 LBX1P52954 281 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 TNNC1P63316 161 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 SLC39A5Q6ZMH5 540 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 TANC1Q9C0D5 1861 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 ANKRD62A6NC57 917 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 PQBP1O60828 265 aaKnown RBP21.69■■□□□ 1.06
HDDC3-202ENST00000394272 MOCS3O95396 460 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 TMEM253P0C7T8 217 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 SKIP12755 728 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 AFF1P51825 1210 aaKnown RBP21.69■■□□□ 1.06
HDDC3-202ENST00000394272 GPNMBQ14956 572 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 ZNF598Q86UK7 904 aaKnown RBP21.69■■□□□ 1.06
HDDC3-202ENST00000394272 RTN4RL1Q86UN2 441 aaPredicted RBP21.69■■□□□ 1.06
HDDC3-202ENST00000394272 WHAMMQ8TF30 809 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 GOLGA2P5Q9HBQ8 144 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 RGS18Q9NS28 235 aa21.69■■□□□ 1.06
HDDC3-202ENST00000394272 A0A0A6YYK5 440 aaPredicted RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 ARL5CA6NH57 179 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 CILPO75339 1184 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 FTLP02792 175 aaPredicted RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 COL6A1P12109 1028 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 UNGP13051 313 aaPredicted RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 ATN1P54259 1190 aaPredicted RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 INCA1Q0VD86 236 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms