RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 POLG2Q9UHN1 485 aa14□□□□□ -0.17
USP49-203ENST00000394253 PKP3Q9Y446 797 aa14□□□□□ -0.17
USP49-203ENST00000394253 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
USP49-203ENST00000394253 HUS1O60921 280 aa14□□□□□ -0.17
USP49-203ENST00000394253 IFNA14P01570 189 aa14□□□□□ -0.17
USP49-203ENST00000394253 FAM200BP0CF97 657 aa14□□□□□ -0.17
USP49-203ENST00000394253 CHN1P15882 459 aa14□□□□□ -0.17
USP49-203ENST00000394253 RAD23AP54725 363 aa14□□□□□ -0.17
USP49-203ENST00000394253 LRRC14Q15048 493 aa14□□□□□ -0.17
USP49-203ENST00000394253 PGK2P07205 417 aa14□□□□□ -0.17
USP49-203ENST00000394253 TCN1P20061 433 aaPredicted RBP14□□□□□ -0.17
USP49-203ENST00000394253 SDC4P31431 198 aa14□□□□□ -0.17
USP49-203ENST00000394253 AP1S1P61966 158 aa14□□□□□ -0.17
USP49-203ENST00000394253 TRIM32Q13049 653 aa14□□□□□ -0.17
USP49-203ENST00000394253 KIAA0825Q8IV33 1275 aa14□□□□□ -0.17
USP49-203ENST00000394253 EFCAB10A6NFE3 127 aa14□□□□□ -0.17
USP49-203ENST00000394253 VWA5AO00534 786 aa14□□□□□ -0.17
USP49-203ENST00000394253 BCAR1P56945 870 aa14□□□□□ -0.17
USP49-203ENST00000394253 CCNA1P78396 465 aa14□□□□□ -0.17
USP49-203ENST00000394253 NMD3Q96D46 503 aaKnown RBP14□□□□□ -0.17
USP49-203ENST00000394253 PAGR1Q9BTK6 254 aa14□□□□□ -0.17
USP49-203ENST00000394253 ALAS1P13196 640 aa14□□□□□ -0.17
USP49-203ENST00000394253 PWP1Q13610 501 aa14□□□□□ -0.17
USP49-203ENST00000394253 IFNEQ86WN2 208 aa14□□□□□ -0.17
USP49-203ENST00000394253 C10orf53Q8N6V4 93 aa14□□□□□ -0.17
USP49-203ENST00000394253 SERPINB12Q96P63 405 aa14□□□□□ -0.17
USP49-203ENST00000394253 SLC9A7Q96T83 725 aa14□□□□□ -0.17
USP49-203ENST00000394253 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
USP49-203ENST00000394253 PALD1Q9ULE6 856 aa14□□□□□ -0.17
USP49-203ENST00000394253 FOXO3O43524 673 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 TNFRSF21O75509 655 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 ADARP55265 1226 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 ZNF667Q5HYK9 610 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 SKAP2O75563 359 aaPredicted RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 SEMA3DO95025 777 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 ACTR2P61160 394 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 ORC2Q13416 577 aaPredicted RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 ZNF235Q14590 738 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 ITIH4Q14624 930 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 SAMD3Q8N6K7 520 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 RBBP8NLQ8NC74 664 aaPredicted RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 PLBD2Q8NHP8 589 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 AP5M1Q9H0R1 490 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CYP2C19P33261 490 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 S100A13Q99584 98 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CLIC4Q9Y696 253 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 DARSP14868 501 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 COBLL1Q53SF7 1204 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CCDC126Q96EE4 140 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 LATS2Q9NRM7 1088 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 K7ERI5 159 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 KLHL41O60662 606 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 RORBQ92753 470 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 XPO7Q9UIA9 1087 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 SPACA6W5XKT8 324 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 ADGRA2Q96PE1 1338 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 FAM47E-STBD1D6RA91 191 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 APRTP07741 180 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 SMCO1Q147U7 214 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 TMEM63BQ5T3F8 832 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 RDM1Q8NG50 284 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 MTMR6Q9Y217 621 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CHD4Q14839 1912 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 BTBD18B2RXH4 712 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 USP14P54578 494 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 CORO7P57737 925 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 POLNQ7Z5Q5 900 aa13.99□□□□□ -0.17
USP49-203ENST00000394253 SMAD5Q99717 465 aaKnown RBP13.99□□□□□ -0.17
USP49-203ENST00000394253 F8W810 466 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 DDHD2O94830 711 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 NUDT2P50583 147 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 TRAF3Q13114 568 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
USP49-203ENST00000394253 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
USP49-203ENST00000394253 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 EPHX4Q8IUS5 362 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 GSTM1P09488 218 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 ZNF200P98182 395 aaPredicted RBP13.98□□□□□ -0.17
USP49-203ENST00000394253 OASLQ15646 514 aaKnown RBP13.98□□□□□ -0.17
USP49-203ENST00000394253 AP3S1Q92572 193 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 MSTO1Q9BUK6 570 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 DSN1Q9H410 356 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 RERGLQ9H628 205 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 MCM8Q9UJA3 840 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 DYRK3O43781 588 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 SERPIND1P05546 499 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
USP49-203ENST00000394253 CEP170P1Q96L14 293 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 CLIC6Q96NY7 704 aa13.98□□□□□ -0.17
USP49-203ENST00000394253 CHID1Q9BWS9 393 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms