RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 C6orf203Q9P0P8 240 aaPredicted RBP3.84□□□□□ -1.8
XRN1-202ENST00000392981 NCDNQ9UBB6 729 aa3.84□□□□□ -1.8
XRN1-202ENST00000392981 SRP68Q9UHB9 627 aaKnown RBP3.84□□□□□ -1.8
XRN1-202ENST00000392981 HSF4Q9ULV5 492 aa3.84□□□□□ -1.8
XRN1-202ENST00000392981 SCAF8Q9UPN6 1271 aaKnown RBP3.84□□□□□ -1.8
XRN1-202ENST00000392981 KNSTRNQ9Y448 316 aa3.84□□□□□ -1.8
XRN1-202ENST00000392981 ZFP37Q9Y6Q3 630 aaPredicted RBP3.84□□□□□ -1.8
XRN1-202ENST00000392981 CTAGE9A4FU28 777 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 VGLL3A8MV65 326 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 DNPH1O43598 174 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 IFNB1P01574 187 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 AHSGP02765 367 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 PSMA3P25788 255 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 AP2B1P63010 937 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 FSTL1Q12841 308 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RAB32Q13637 225 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 DUOXA2Q1HG44 320 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SMU1Q2TAY7 513 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 BTBD8Q5XKL5 378 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 IYDQ6PHW0 289 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 TOM1L2Q6ZVM7 507 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 USP49Q70CQ1 688 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 EGFL6Q8IUX8 553 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SLC4A11Q8NBS3 891 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RMDN1Q96DB5 314 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 GBP4Q96PP9 640 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 TMEM237Q96Q45 408 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 C22orf23Q9BZE7 217 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 FOXQ1Q9C009 403 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ATXN3LQ9H3M9 355 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 CYP4F12Q9HCS2 524 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RRP7BPQ9NSQ0 103 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 COMMD8Q9NX08 183 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 HERC5Q9UII4 1024 aaKnown RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 KCND3Q9UK17 655 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SYNJ2BP-COX16A0A087WUM0 186 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 A0A1W2PQ09 198 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 MYO1GB0I1T2 1018 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 J3QL48 77 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 TGM5O43548 720 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 COQ9O75208 318 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SYPP08247 313 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RPL17P18621 184 aaKnown RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 ARFIP2P53365 341 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 INAVAQ3KP66 663 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SETMARQ53H47 684 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 IGSF11Q5DX21 431 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SZRD1Q7Z422 152 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.83□□□□□ -1.8
XRN1-202ENST00000392981 ETNPPLQ8TBG4 499 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 CASP10Q92851 521 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 HIC2Q96JB3 615 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 MAP7D2Q96T17 732 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ZFYVE21Q9BQ24 234 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ARHGAP39Q9C0H5 1083 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 GULP1Q9UBP9 304 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 hCG_1809904A0A1W2PP81 198 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 A0A1W2PPE2 198 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 A0A1W2PR64 198 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 E7EVH7 732 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 KIAA0391O15091 583 aaKnown RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 FANCGO15287 622 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RIPK2O43353 540 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 HTRA2O43464 458 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 AOC2O75106 756 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 PRAMEF1O95521 474 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 CYP17A1P05093 508 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 TPM1P09493 284 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 POTEJP0CG39 1038 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SOX8P57073 446 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 CDKAL1Q5VV42 579 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ANKRD40Q6AI12 368 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 DRICH1Q6PGQ1 229 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 ATG14Q6ZNE5 492 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SPATA21Q7Z572 469 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ANKLE1Q8NAG6 615 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 POMGNT2Q8NAT1 580 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 KDF1Q8NAX2 398 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 BBOF1Q8ND07 529 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 CPT1BQ92523 772 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SERINC2Q96SA4 455 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 BRIP1Q9BX63 1249 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 PCDHAC1Q9H158 963 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 DDX43Q9NXZ2 648 aaKnown RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 TARBP1Q13395 1621 aaKnown RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 BIVM-ERCC5R4GMW8 1640 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 BUD31P41223 144 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 CDR1P51861 262 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 PHC1P78364 1004 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 SLC6A3Q01959 620 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 RAB30Q15771 203 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 IL27RAQ6UWB1 636 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 OVCH1Q7RTY7 1134 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 MAFAQ8NHW3 353 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 PIP4K2CQ8TBX8 421 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 FAM71BQ8TC56 605 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 ZKSCAN4Q969J2 545 aaPredicted RBP3.83□□□□□ -1.8
XRN1-202ENST00000392981 KLHDC7BQ96G42 594 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 HES6Q96HZ4 224 aa3.83□□□□□ -1.8
XRN1-202ENST00000392981 TTYH1Q9H313 450 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms