RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 VTA1Q9NP79 307 aa17.44■□□□□ 0.38
SNX9-201ENST00000392185 SNTG2Q9NY99 539 aa17.44■□□□□ 0.38
SNX9-201ENST00000392185 SLC1A1P43005 524 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 ZNF280AP59817 542 aaPredicted RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 EFHC2Q5JST6 749 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 FEZF2Q8TBJ5 459 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 TINF2Q9BSI4 451 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 KLHL14Q9P2G3 628 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 WDR35Q9P2L0 1181 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 GTPBP10A4D1E9 387 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX9-201ENST00000392185 GRIK1P39086 918 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 ARL4CP56559 192 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 EIF3EP60228 445 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 MIIPQ5JXC2 388 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 BTBD8Q5XKL5 378 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 HASPINQ8TF76 798 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 CCT6BQ92526 530 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 CCDC68Q9H2F9 335 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 L2HGDHQ9H9P8 463 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 METTL5Q9NRN9 209 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 UBQLN1Q9UMX0 589 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 RNF225M0QZC1 329 aaPredicted RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 GOLGA7BQ2TAP0 167 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 HEATR6Q6AI08 1181 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 PCGF5Q86SE9 256 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 WNK4Q96J92 1243 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 LRP6O75581 1613 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 TAF6P49848 677 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 PMS2P54278 862 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 AP1B1Q10567 949 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 BZW1Q7L1Q6 419 aaKnown RBP17.43■□□□□ 0.38
SNX9-201ENST00000392185 DCLK2Q8N568 766 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 C9orf72Q96LT7 481 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 PORCNQ9H237 461 aa17.43■□□□□ 0.38
SNX9-201ENST00000392185 FAM187AA6NFU0 413 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 PLA2G6O60733 806 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 SRGAP2BP0DMP2 458 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 KCNT1Q5JUK3 1230 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 CELF3Q5SZQ8 465 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 EMC1Q8N766 993 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 BTBD7Q9P203 1132 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 SPDYE5A6NIY4 337 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 DDX3XO00571 662 aaKnown RBP eCLIP17.42■□□□□ 0.388e-15■■□□□ 13.6
SNX9-201ENST00000392185 ACKR2O00590 384 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 TGFB1I1O43294 461 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 MAPTP10636 758 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 MAGOHP61326 146 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 TAP1Q03518 808 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 MAP7D1Q3KQU3 841 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 CCNI2Q6ZMN8 369 aaPredicted RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 ZBED8Q8IZ13 594 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 ATL2Q8NHH9 583 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 ZC3H15Q8WU90 426 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 PGBD4Q96DM1 585 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 THOC1Q96FV9 657 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 AIPL1Q9NZN9 384 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 DMGDHQ9UI17 866 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 AHDC1Q5TGY3 1603 aaPredicted RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 LRRIQ3A6PVS8 624 aaPredicted RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 CST8O60676 142 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 ADRB2P07550 413 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 RALAP11233 206 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 EIF3BP55884 814 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 KCNMA1Q12791 1236 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 IFT88Q13099 833 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 PKNOX2Q96KN3 472 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 NCAPGQ9BPX3 1015 aa17.42■□□□□ 0.38
SNX9-201ENST00000392185 DDX56Q9NY93 547 aaKnown RBP17.42■□□□□ 0.38
SNX9-201ENST00000392185 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
SNX9-201ENST00000392185 CDK17Q00537 523 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 CXCL17Q6UXB2 119 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 SPATA2LQ8IUW3 424 aaPredicted RBP17.41■□□□□ 0.38
SNX9-201ENST00000392185 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 IL9RQ01113 521 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 ATG4AQ8WYN0 398 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 ARHGEF2Q92974 986 aaKnown RBP17.41■□□□□ 0.38
SNX9-201ENST00000392185 HES2Q9Y543 173 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 TIMM13Q9Y5L4 95 aaPredicted RBP17.41■□□□□ 0.38
SNX9-201ENST00000392185 PLIN4Q96Q06 1357 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 ROR1Q01973 937 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 PID1Q7Z2X4 250 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 SMC1BQ8NDV3 1235 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 BCAS3Q9H6U6 928 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 KIF9Q9HAQ2 790 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 C5P01031 1676 aa17.41■□□□□ 0.38
SNX9-201ENST00000392185 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms