RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PRKAB2O43741 272 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 RANBP6O60518 1105 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 HSF2BPO75031 334 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CPNE3O75131 537 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 LARGE1O95461 756 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FGFR1OPO95684 399 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 LDHAP00338 332 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 IGHA2P01877 340 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KRT14P02533 472 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 HLA-DOAP06340 250 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GLI1P08151 1106 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GSTA1P08263 222 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 INHBBP09529 407 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CTAGE8P0CG41 777 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GHRP10912 638 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PDHBP11177 359 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PCP11498 1178 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ATP2A2P16615 1042 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ITPKAP23677 461 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GJB2P29033 226 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 S100A5P33763 92 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 HOXD12P35452 270 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PCK1P35558 622 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TCF7P36402 384 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 IARSP41252 1262 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CRKP46108 304 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KIF11P52732 1056 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BLVRAP53004 296 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FCGRTP55899 365 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KRT85P78386 507 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FANCCQ00597 558 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GUCY1B3Q02153 619 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FAM160A1Q05DH4 1040 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ITIH3Q06033 890 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SULT2A1Q06520 285 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CKAP4Q07065 602 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KLC1Q07866 573 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PPIDQ08752 370 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KIF5AQ12840 1032 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PICALMQ13492 652 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CUL4AQ13619 759 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 PKP1Q13835 747 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BYSLQ13895 437 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TOB2Q14106 344 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BTG3Q14201 252 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ARHGEF6Q15052 776 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SAFBQ15424 915 aaKnown RBP eCLIP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 NDUFA5Q16718 116 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ME3Q16798 604 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SKIDA1Q1XH10 827 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CMPK2Q5EBM0 449 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM67Q5HYA8 995 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BEND6Q5SZJ8 279 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 LDLRAD1Q5T700 205 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 STRIP1Q5VSL9 837 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CDKAL1Q5VV42 579 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KIAA0319Q5VV43 1072 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CCSAPQ6IQ19 270 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 DTHD1Q6ZMT9 781 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CYFIP1Q7L576 1253 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CTAGE6Q86UF2 777 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 RAB11FIP4Q86YS3 637 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 C1QL4Q86Z23 238 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TBC1D10CQ8IV04 446 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 MAPKAPK5Q8IW41 473 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 MAP7D3Q8IWC1 876 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CTAGE4Q8IX94 777 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 MB21D2Q8IYB1 491 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CHCHD4Q8N4Q1 142 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 IGSF22Q8N9C0 903 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SYT2Q8N9I0 419 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SCAIQ8N9R8 606 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GDAP1Q8TB36 358 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SUN5Q8TC36 379 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SH3RF3Q8TEJ3 882 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TRPC4APQ8TEL6 797 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF384Q8TF68 577 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TGFBRAP1Q8WUH2 860 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 WDR60Q8WVS4 1066 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ESR2Q92731 530 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KIFAP3Q92845 792 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BRF1Q92994 677 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 HAUS1Q96CS2 278 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CLMNQ96JQ2 1002 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM87BQ96K49 555 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 IFT74Q96LB3 600 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 HEXIM2Q96MH2 286 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 OLFM3Q96PB7 478 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 NDNQ99608 321 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 BPIFA3Q9BQP9 254 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CENPKQ9BS16 269 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 UBAC1Q9BSL1 405 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 OSBPL5Q9H0X9 879 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 DNAJC25Q9H1X3 360 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CARD9Q9H257 536 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 KAT14Q9H8E8 782 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF287Q9HBT7 754 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 NOD2Q9HC29 1040 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms