RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 FAM189A1O60320 539 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 ASS1P00966 412 aaKnown RBP15.89■□□□□ 0.13
SCFD2-201ENST00000388940 RALAP11233 206 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 CHN1P15882 459 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 IFI35P80217 286 aaPredicted RBP15.89■□□□□ 0.13
SCFD2-201ENST00000388940 SNX1Q13596 522 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 UBAP2Q5T6F2 1119 aaKnown RBP15.89■□□□□ 0.13
SCFD2-201ENST00000388940 IER5Q5VY09 327 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 PHLDB2Q86SQ0 1253 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 PACS2Q86VP3 889 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 BBOF1Q8ND07 529 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 FEZF2Q8TBJ5 459 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 MDM1Q8TC05 714 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 ZNF606Q8WXB4 792 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 TRAIPQ9BWF2 469 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 IMPG2Q9BZV3 1241 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 CDC42EP4Q9H3Q1 356 aaKnown RBP15.89■□□□□ 0.13
SCFD2-201ENST00000388940 CCDC134Q9H6E4 229 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 BTBD7Q9P203 1132 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 IP6K2Q9UHH9 426 aa15.89■□□□□ 0.13
SCFD2-201ENST00000388940 SOWAHBA6NEL2 793 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 GAS2O43903 313 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 MSCO60682 206 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 TOM1L1O75674 476 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 DRD4P21917 467 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 MMP8P22894 467 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 TAS2R40P59535 323 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 SURF1Q15526 300 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 C2CD6Q53TS8 623 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 CDCA2Q69YH5 1023 aaPredicted RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 METTL7BQ6UX53 244 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 MMS22LQ6ZRQ5 1243 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 EPS8L3Q8TE67 593 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 ATXN2LQ8WWM7 1075 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 ATG4AQ8WYN0 398 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 CHMP6Q96FZ7 201 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 SEC16BQ96JE7 1060 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 SERPINB12Q96P63 405 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 MRPL4Q9BYD3 311 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 R3HDM2Q9Y2K5 976 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 QPCTQ16769 361 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 TREML2Q5T2D2 321 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 PASD1Q8IV76 773 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 EXOC8Q8IYI6 725 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 PRPF31Q8WWY3 499 aaKnown RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 ZNF317Q96PQ6 595 aaPredicted RBP15.88■□□□□ 0.13
SCFD2-201ENST00000388940 OSBPL8Q9BZF1 889 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 PAPPA2Q9BXP8 1791 aa15.88■□□□□ 0.13
SCFD2-201ENST00000388940 TCEA3O75764 348 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TTC4O95801 387 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 ATF2P15336 505 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TCF7P36402 384 aaPredicted RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 ITGA8P53708 1063 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 LLGL1Q15334 1064 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TAOK1Q7L7X3 1001 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CCDC25Q86WR0 208 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 RELL1Q8IUW5 271 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CCDC50Q8IVM0 306 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 SCLT1Q96NL6 688 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 ACO2Q99798 780 aaKnown RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 ZNF518BQ9C0D4 1074 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TCRBV5S1A1TA0A578 114 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CALB1P05937 261 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 TMEM191BP0C7N4 346 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CHKAP35790 457 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CETN2P41208 172 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 IFT88Q13099 833 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 VGLL4Q14135 290 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 MXD4Q14582 209 aaPredicted RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 GKAP1Q5VSY0 366 aaPredicted RBP15.87■□□□□ 0.13
SCFD2-201ENST00000388940 LRRC38Q5VT99 294 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 RCOR2Q8IZ40 523 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CACNA2D3Q8IZS8 1091 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 CCDC89Q8N998 374 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 SPATC1LQ9H0A9 340 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 ANAPC5Q9UJX4 755 aa15.87■□□□□ 0.13
SCFD2-201ENST00000388940 DICER1Q9UPY3 1922 aaKnown RBP15.86■□□□□ 0.13
SCFD2-201ENST00000388940 IGKV6-21A0A0C4DH24 114 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 O00370 1275 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 OGTO15294 1046 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 LMNB2Q03252 620 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 MCL1Q07820 350 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 PLCB4Q15147 1175 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 SGSM1Q2NKQ1 1148 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 CPLX4Q7Z7G2 160 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 GPC2Q8N158 579 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 UHMK1Q8TAS1 419 aaKnown RBP15.86■□□□□ 0.13
SCFD2-201ENST00000388940 P3H4Q92791 437 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 SELENOSQ9BQE4 189 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 FOXP3Q9BZS1 431 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 SMIM23A6NLE4 172 aa15.86■□□□□ 0.13
SCFD2-201ENST00000388940 TTLL13PA6NNM8 815 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms