RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
ABCA3-202ENST00000382381 PROM2Q8N271 834 aa13.54□□□□□ -0.24
ABCA3-202ENST00000382381 IPMKQ8NFU5 416 aa13.54□□□□□ -0.24
ABCA3-202ENST00000382381 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
ABCA3-202ENST00000382381 ZBTB39O15060 712 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 KRT4P19013 534 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 EPHX2P34913 555 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SLC16A1P53985 500 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 MIER2Q8N344 545 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 C18orf8Q96DM3 657 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 PNKPQ96T60 521 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 C20orf96Q9NUD7 363 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 LINC00854A0A1B0GVQ3 168 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 C5orf58C9J3I9 102 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SOAT1P35610 550 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 CARSP49589 748 aaKnown RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 GRM4Q14833 912 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 ATP6V1G3Q96LB4 118 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 KCNH4Q9UQ05 1017 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 IMPDH2P12268 514 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SUPT3HB4E1H0 165 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 TPST1O60507 370 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 MB21D2Q8IYB1 491 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 KAT2BQ92831 832 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 SRPK1Q96SB4 655 aaKnown RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 PALMDQ9NP74 551 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 XPO7Q9UIA9 1087 aaKnown RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 IL10P22301 178 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 MAGEA9P43362 315 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 FBXW10Q5XX13 1052 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 CD274Q9NZQ7 290 aa13.53□□□□□ -0.24
ABCA3-202ENST00000382381 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
ABCA3-202ENST00000382381 DEUP1Q05D60 604 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 MAP1SQ66K74 1059 aaPredicted RBP13.52□□□□□ -0.24
ABCA3-202ENST00000382381 SLC44A2Q8IWA5 706 aaPredicted RBP13.52□□□□□ -0.24
ABCA3-202ENST00000382381 SNX31Q8N9S9 440 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 CELF4Q9BZC1 486 aaKnown RBP13.52□□□□□ -0.24
ABCA3-202ENST00000382381 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 HIC1Q14526 733 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 CNGA3Q16281 694 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 GJB7Q6PEY0 223 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 PARP9Q8IXQ6 854 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 APPL2Q8NEU8 664 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 VMP1Q96GC9 406 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 MAGEB10Q96LZ2 347 aaPredicted RBP13.52□□□□□ -0.24
ABCA3-202ENST00000382381 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
ABCA3-202ENST00000382381 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 KLK14Q9P0G3 267 aa13.52□□□□□ -0.24
ABCA3-202ENST00000382381 NDUFS3O75489 264 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 HIST1H2AGP0C0S8 130 aaPredicted RBP13.52□□□□□ -0.25
ABCA3-202ENST00000382381 HIST1H2ADP20671 130 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 OR1G1P47890 313 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 TRPC1P48995 793 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 LONP2Q86WA8 852 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 SLC7A14Q8TBB6 771 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 THTPAQ9BU02 230 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 KDM4CQ9H3R0 1056 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 USE1Q9NZ43 259 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 ZC3H7BQ9UGR2 993 aaKnown RBP13.52□□□□□ -0.25
ABCA3-202ENST00000382381 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 ORC4O43929 436 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 CAPN15O75808 1086 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
ABCA3-202ENST00000382381 SFNP31947 248 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 DCAF6Q58WW2 860 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 GLRA4Q5JXX5 417 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 RFFLQ8WZ73 363 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 EHD2Q9NZN4 543 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 C3orf70A6NLC5 250 aaPredicted RBP13.52□□□□□ -0.25
ABCA3-202ENST00000382381 ASAP2O43150 1006 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 WDR47O94967 919 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 MTBPQ96DY7 904 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 RBM15Q96T37 977 aaKnown RBP eCLIP13.52□□□□□ -0.25
ABCA3-202ENST00000382381 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
ABCA3-202ENST00000382381 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
ABCA3-202ENST00000382381 FAM47DPA6NHR8 397 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 CCDC159P0C7I6 412 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 CHN1P15882 459 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
ABCA3-202ENST00000382381 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
ABCA3-202ENST00000382381 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
ABCA3-202ENST00000382381 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms