RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NDUFAF2Q8N183 169 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SRBD1Q8N5C6 995 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 DAGLBQ8NCG7 672 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 GRAPLQ8TC17 118 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 UBXN6Q9BZV1 441 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 TMX1Q9H3N1 280 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 DHX33Q9H6R0 707 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SRP68Q9UHB9 627 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SHOC2Q9UQ13 582 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ATP11BQ9Y2G3 1177 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 METP08581 1390 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ATAD5Q96QE3 1844 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ADCY6O43306 1168 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SNAP91O60641 907 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 RPS6KA4O75676 772 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 RXRAP19793 462 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 KCNQ4P56696 695 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SLC34A1Q06495 639 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 MCL1Q07820 350 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 DMP1Q13316 513 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SUZ12Q15022 739 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 P3H1Q32P28 736 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 MTX3Q5HYI7 312 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 LRRC8EQ6NSJ5 796 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 FAM92BQ6ZTR7 304 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 MAGEB10Q96LZ2 347 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ST7Q9NRC1 585 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SYNPO2Q9UMS6 1093 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 GAKO14976 1311 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 DISP2A7MBM2 1401 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 E7EWF7 191 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 RARGP13631 454 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 CAPZA2P47755 286 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 POLD2P49005 469 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 CDK7P50613 346 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 KLHL12Q53G59 568 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 TJAP1Q5JTD0 557 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 RC3H1Q5TC82 1133 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 LRRC31Q6UY01 552 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 CCDC36Q8IYA8 594 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 CNOT6LQ96LI5 555 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ASB2Q96Q27 587 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 COA1Q9GZY4 146 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ZSWIM4Q9H7M6 989 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 KCNK4Q9NYG8 393 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 AMACRQ9UHK6 382 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 HBS1LQ9Y450 684 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ZMYM2Q9UBW7 1377 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 GTF2H1P32780 548 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 NDUFA8P51970 172 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 TIMM10P62072 90 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 PKN2Q16513 984 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 HERC4Q5GLZ8 1057 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ZNF589Q86UQ0 364 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SPICE1Q8N0Z3 855 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 SVOPQ8N4V2 548 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ZBTB38Q8NAP3 1195 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 HINFPQ9BQA5 517 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 CCDC90BQ9GZT6 254 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 PLEKHA5Q9HAU0 1116 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ASAP1Q9ULH1 1129 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 FNDC3AQ9Y2H6 1198 aaKnown RBP5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ZDHHC9Q9Y397 364 aa5.12□□□□□ -1.59
PTPRD-203ENST00000381196 ASNA1O43681 348 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SLC18A3Q16572 532 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 GPATCH4Q5T3I0 446 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 RNF219Q5W0B1 726 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 C11orf57Q6ZUT1 292 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 ADCK1Q86TW2 530 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MB21D1Q8N884 522 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 NECAB1Q8N987 351 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PCYOX1LQ8NBM8 494 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SEPT1Q8WYJ6 367 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 RMDN3Q96TC7 470 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 AMNQ9BXJ7 453 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DCLK3Q9C098 648 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 FAM49AQ9H0Q0 323 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 GDPD2Q9HCC8 539 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 C1orf112Q9NSG2 853 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PNPLA3Q9NST1 481 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 VTI1BQ9UEU0 232 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MKLN1Q9UL63 735 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 NR2E3Q9Y5X4 410 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 C5P01031 1676 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 DDX60Q8IY21 1712 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MGRN1O60291 552 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 GZMAP12544 262 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MLH1P40692 756 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 CTDSPL2Q05D32 466 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 PPIL2Q13356 520 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 KYNUQ16719 465 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 EXOC3L4Q17RC7 722 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 BNIPLQ7Z465 357 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 LRRC47Q8N1G4 583 aaKnown RBP5.11□□□□□ -1.59
PTPRD-203ENST00000381196 KLC2Q9H0B6 622 aa5.11□□□□□ -1.59
PTPRD-203ENST00000381196 MRPL44Q9H9J2 332 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms