RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TIGD5Q53EQ6 642 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 SPOPLQ6IQ16 392 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 SAMD11Q96NU1 681 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 CRACR2AQ9BSW2 395 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 PLVAPQ9BX97 442 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 GPR62Q9BZJ7 368 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 CERS4Q9HA82 394 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 NUB1Q9Y5A7 615 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 A0A1B0GTH6 734 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 KPNA7A9QM74 516 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 SOX1O00570 391 aaPredicted RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 TEX33O43247 280 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 FGF18O76093 207 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 ATICP31939 592 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 MYO1EQ12965 1108 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 ZNF699Q32M78 642 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 FUT10Q6P4F1 479 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 EHBP1Q8NDI1 1231 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 TMEM169Q96HH4 297 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 VRTNQ9H8Y1 702 aa20.21■□□□□ 0.83
SMN2-202ENST00000380742 APOBEC3GQ9HC16 384 aaKnown RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 RTN4Q9NQC3 1192 aaKnown RBP20.21■□□□□ 0.83
SMN2-202ENST00000380742 TRANK1O15050 2925 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 RB1P06400 928 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 SLC9A1P19634 815 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 PLCB3Q01970 1234 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 CETN1Q12798 172 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 GBP6Q6ZN66 633 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 TAS1R1Q7RTX1 841 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 RNF168Q8IYW5 571 aaPredicted RBP20.2■□□□□ 0.82
SMN2-202ENST00000380742 TAF4BQ92750 862 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 SUSD3Q96L08 255 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 GDAP2Q9NXN4 497 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 POLIQ9UNA4 740 aa20.2■□□□□ 0.82
SMN2-202ENST00000380742 M0QZQ0 153 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 AP5Z1O43299 807 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 PAX3P23760 479 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 PON1P27169 355 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 UBASH3AP57075 661 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 NOP14P78316 857 aaKnown RBP20.19■□□□□ 0.82
SMN2-202ENST00000380742 UBXN1Q04323 297 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 NR1I3Q14994 352 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 EXOC3L4Q17RC7 722 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 WDR72Q3MJ13 1102 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 FILIP1LQ4L180 1135 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 DSTYKQ6XUX3 929 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 DDX53Q86TM3 631 aaKnown RBP20.19■□□□□ 0.82
SMN2-202ENST00000380742 FBXO22Q8NEZ5 403 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 TATDN2Q93075 761 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
SMN2-202ENST00000380742 ALG13Q9NP73 1137 aaKnown RBP20.19■□□□□ 0.82
SMN2-202ENST00000380742 IFNKQ9P0W0 207 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 NXF1Q9UBU9 619 aaKnown RBP20.19■□□□□ 0.82
SMN2-202ENST00000380742 SNX9Q9Y5X1 595 aa20.19■□□□□ 0.82
SMN2-202ENST00000380742 SF3B1O75533 1304 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMN2-202ENST00000380742 TRAPPC3O43617 180 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 APBA1Q02410 837 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 KRT17Q04695 432 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 LRMPQ12912 555 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 PTPN21Q16825 1174 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 ZNF667Q5HYK9 610 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 FKBP15Q5T1M5 1219 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 FAM171A1Q5VUB5 890 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 DPY19L2P1Q6NXN4 242 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 TRIM65Q6PJ69 517 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 SPPL3Q8TCT6 385 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 ARNTL2Q8WYA1 636 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 B3GALT6Q96L58 329 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 C11orf84Q9BUA3 381 aaPredicted RBP20.18■□□□□ 0.82
SMN2-202ENST00000380742 IMPG2Q9BZV3 1241 aa20.18■□□□□ 0.82
SMN2-202ENST00000380742 EPOPA6NHQ4 379 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 H3BNC9 293 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 CYB561D2O14569 222 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 CLSTN1O94985 981 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 DNAJB1P25685 340 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 KLK7P49862 253 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 ELAVL2Q12926 359 aaKnown RBP20.17■□□□□ 0.82
SMN2-202ENST00000380742 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 CCDC150Q8NCX0 1101 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 ERGIC2Q96RQ1 377 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 XPO4Q9C0E2 1151 aaKnown RBP20.17■□□□□ 0.82
SMN2-202ENST00000380742 ZNF576Q9H609 170 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 SIX2Q9NPC8 291 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 PCDHB8Q9UN66 801 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 SIK3Q9Y2K2 1263 aa20.17■□□□□ 0.82
SMN2-202ENST00000380742 GRM6O15303 877 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 SOD2P04179 222 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 FGFR3P22607 806 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 TKTP29401 623 aaKnown RBP20.16■□□□□ 0.82
SMN2-202ENST00000380742 TNNC1P63316 161 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 GPM6BQ13491 265 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 SYCP1Q15431 976 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 SOWAHAQ2M3V2 549 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
SMN2-202ENST00000380742 PHLDB3Q6NSJ2 640 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms