RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 EPAS1Q99814 870 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 PDAP1Q13442 181 aaKnown RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 GRAPQ13588 217 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 EAPPQ56P03 285 aaPredicted RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 DEPDC1Q5TB30 811 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 GRAPLQ8TC17 118 aaPredicted RBP17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 APBB2Q92870 758 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZSWIM1Q9BR11 485 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 SIKE1Q9BRV8 207 aa17.9■□□□□ 0.46
COL4A3BP-203ENST00000380494 USP17L10C9JJH3 530 aa17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 PSMA4P25789 261 aaKnown RBP17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 ATP6V1E1P36543 226 aa17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 SLC13A5Q86YT5 568 aaPredicted RBP17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 EPS8L3Q8TE67 593 aaKnown RBP17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 HSPBP1Q9NZL4 362 aa17.89■□□□□ 0.46
COL4A3BP-203ENST00000380494 PSTPIP1O43586 416 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 SPDYCQ5MJ68 293 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 CCDC103Q8IW40 242 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 CNDP1Q96KN2 507 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 SRRM3A6NNA2 597 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 STK4Q13043 487 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 GJC2Q5T442 439 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 PID1Q7Z2X4 250 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 HAUS6Q7Z4H7 955 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 PPP2R3CQ969Q6 453 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 NLRP4Q96MN2 994 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 COA1Q9GZY4 146 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 TASP1Q9H6P5 420 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF556Q9HAH1 456 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 A0A0A6YYK5 440 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 CES2O00748 559 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 RC3H1Q5TC82 1133 aaKnown RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 TAGAPQ8N103 731 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 ASAP3Q8TDY4 903 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 POLR3FQ9H1D9 316 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 RAB6BQ9NRW1 208 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 SESN1Q9Y6P5 492 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 PRR23D1E9PI22 279 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 DLGAP3O95886 979 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 PRR23D2P0DMB1 279 aaPredicted RBP17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 KLK7P49862 253 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 IRGCQ6NXR0 463 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 THEM5Q8N1Q8 247 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF507Q8TCN5 953 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 EGFL8Q99944 293 aa17.89■□□□□ 0.45
COL4A3BP-203ENST00000380494 HUS1O60921 280 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 KCNMA1Q12791 1236 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 IZUMO2Q6UXV1 221 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 RNF135Q8IUD6 432 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 STMN3Q9NZ72 180 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 APPL1Q9UKG1 709 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 AGO2Q9UKV8 859 aaKnown RBP17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC8A2Q9UPR5 921 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 TM9SF1O15321 606 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF786Q8N393 782 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 RSAD1Q9HA92 442 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 SAC3D1A6NKF1 404 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 UBOX5O94941 541 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 HMOX2P30519 316 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 SERPINB8P50452 374 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 NUP93Q8N1F7 819 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 TRIM54Q9BYV2 358 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 TNPO2O14787 897 aaKnown RBP17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 ATP5BP06576 529 aaKnown RBP17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 APRTP07741 180 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZNF280CQ8ND82 737 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAM162AQ96A26 154 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 C18orf8Q96DM3 657 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 FAR2Q96K12 515 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 EPS8L2Q9H6S3 715 aa17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 CAB39Q9Y376 341 aaPredicted RBP17.88■□□□□ 0.45
COL4A3BP-203ENST00000380494 MYMKA6NI61 221 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 ZCCHC18P0CG32 403 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 HERVK_113P62684 666 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 SLC34A1Q06495 639 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 DUOXA2Q1HG44 320 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 PREX2Q70Z35 1606 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 PPP1R36Q96LQ0 422 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 LBHD1Q9BQE6 289 aaPredicted RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 KANSL1LA0AUZ9 987 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 IQCA1LA6NCM1 817 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 CAND2O75155 1236 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 POLBP06746 335 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 CPA2P48052 419 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 RAB14P61106 215 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 USP10Q14694 798 aaKnown RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 PCDHGB4Q9UN71 923 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 GLRA3O75311 464 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 FDPSP14324 419 aaKnown RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 NUDT2P50583 147 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 VCPP55072 806 aaKnown RBP17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 KCNK10P57789 538 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 SNAP25P60880 206 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 CNPY3Q9BT09 278 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 DCDC2Q9UHG0 476 aa17.87■□□□□ 0.45
COL4A3BP-203ENST00000380494 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms