RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HINFPQ9BQA5 517 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.19■□□□□ 0.989e-7■□□□□ 10.7
PDLIM5-205ENST00000380180 DMGDHQ9UI17 866 aaKnown RBP21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 MYADML2A6NDP7 307 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 PGRMC1O00264 195 aaKnown RBP21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 KIF3CO14782 793 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 C6orf222P0C671 652 aaPredicted RBP21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 COMTP21964 271 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 LACTBP83111 547 aaPredicted RBP21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 SLC7A5Q01650 507 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 TMEM132DQ14C87 1099 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 DCAF4L1Q3SXM0 396 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 C2CD6Q53TS8 623 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 ZNF667Q5HYK9 610 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 DCAF12L1Q5VU92 463 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 NOC2LQ9Y3T9 749 aaKnown RBP21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 SCN1AP35498 2009 aa21.18■□□□□ 0.98
PDLIM5-205ENST00000380180 C17orf102A2RUQ5 167 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 ATP8B1O43520 1251 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 CYBAP13498 195 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 EIF4BP23588 611 aaKnown RBP21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 RRM1P23921 792 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 C8orf74Q6P047 294 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 SLC27A1Q6PCB7 646 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 MON1BQ7L1V2 547 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 C7orf31Q8N865 590 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 TRIM11Q96F44 468 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 OGFRQ9NZT2 677 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 PDCD11Q14690 1871 aaKnown RBP21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 MYBL1P10243 752 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 FLT3LGP49771 235 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 GUCY2FP51841 1108 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 PCBP1Q15365 356 aaKnown RBP eCLIP21.17■□□□□ 0.985e-8■■■■■ 41.6
PDLIM5-205ENST00000380180 GLE1Q53GS7 698 aaKnown RBP21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 MFSD14CQ5VZR4 134 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 PHLDB2Q86SQ0 1253 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 TMEM40Q8WWA1 233 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 ALG3Q92685 438 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 EIF2AQ9BY44 585 aaKnown RBP21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 FUT8Q9BYC5 575 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 BCO2Q9BYV7 579 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 AVENQ9NQS1 362 aaPredicted RBP21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 FAM53CQ9NYF3 392 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 C2CD2Q9Y426 696 aa21.17■□□□□ 0.98
PDLIM5-205ENST00000380180 MIF4GDA9UHW6 222 aaKnown RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 SASH3O75995 380 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 ALDH1A1P00352 501 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 RAP1GAPP47736 663 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 GNASQ5JWF2 1037 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 NOTUMQ6P988 496 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 KRT12Q99456 494 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 ZSWIM1Q9BR11 485 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CARD9Q9H257 536 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 SNTG2Q9NY99 539 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 L1RE1Q9UN81 338 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 BRD2P25440 801 aaKnown RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 POLR2BP30876 1174 aaKnown RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 HOXC8P31273 242 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CDH8P55286 799 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 YWHAEP62258 255 aaKnown RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 SNX17Q15036 470 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 LLGL2Q6P1M3 1020 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CCNI2Q6ZMN8 369 aaPredicted RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 APBB1IPQ7Z5R6 666 aaPredicted RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 PHF13Q86YI8 300 aaPredicted RBP21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CPNE8Q86YQ8 564 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 KRT35Q92764 455 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 C11orf70Q9BRQ4 267 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 AP1M1Q9BXS5 423 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CXCL16Q9H2A7 254 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 DPP3Q9NY33 737 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 ADAM22Q9P0K1 906 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 AGAP1Q9UPQ3 857 aa21.16■□□□□ 0.98
PDLIM5-205ENST00000380180 CASP8AP2Q9UKL3 1982 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 GNAT1P11488 350 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 ATICP31939 592 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 GJA9P57773 515 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 NT5DC4Q86YG4 428 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 CD302Q8IX05 232 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 UBL4BQ8N7F7 174 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 TFAP2BQ92481 460 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 CD101Q93033 1021 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 KIF12Q96FN5 646 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 FAXDC2Q96IV6 333 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 VCPIP1Q96JH7 1222 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 SDCBP2Q9H190 292 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 WNT8AQ9H1J5 351 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 ANAPC7Q9UJX3 599 aa21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 TTC7AQ9ULT0 858 aaPredicted RBP21.15■□□□□ 0.98
PDLIM5-205ENST00000380180 MARCKSL1P49006 195 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 TNNC1P63316 161 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 KLHL7Q8IXQ5 586 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 HPDLQ96IR7 371 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 RNPC3Q96LT9 517 aaKnown RBP21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 VRTNQ9H8Y1 702 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 STIM2Q9P246 746 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 ITGA11Q9UKX5 1188 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 HES2Q9Y543 173 aa21.14■□□□□ 0.98
PDLIM5-205ENST00000380180 KRIT1O00522 736 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms