RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ALDH18A1P54886 795 aaKnown RBP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 KDSRQ06136 332 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 MIS18BP1Q6P0N0 1132 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 BTNL9Q6UXG8 535 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 EXOC3L1Q86VI1 746 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.493e-6■■□□□ 11.9
SMAD9-202ENST00000379826 PPM1NQ8N819 430 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 EIF1ADQ8N9N8 165 aaKnown RBP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 FAM84AQ96KN4 292 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 GGA2Q9UJY4 613 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.49
SMAD9-202ENST00000379826 G3BP2Q9UN86 482 aaKnown RBP12.02□□□□□ -0.49
SMAD9-202ENST00000379826 STAMBPO95630 424 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 LMNAP02545 664 aaKnown RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 MARK3P27448 753 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ETNPPLQ8TBG4 499 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 DEPDC1BQ8WUY9 529 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CCT6BQ92526 530 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 DCLK3Q9C098 648 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 SNX3O60493 162 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 RBBP5Q15291 538 aaKnown RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 EEPD1Q7L9B9 569 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 MIEF2Q96C03 454 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 PSMC3IPQ9P2W1 217 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CHD4Q14839 1912 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 NCF2P19878 526 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 MMP13P45452 471 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CCDC117Q8IWD4 279 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ART4Q93070 314 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 FAM193BQ96PV7 902 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 SENP7Q9BQF6 1050 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 STOML1Q9UBI4 398 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 PCDHA3Q9Y5H8 950 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ROBO1Q9Y6N7 1651 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 K7ERI5 159 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 KRT16P08779 473 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 IGBP1P78318 339 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 RRP1BQ14684 758 aaKnown RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CPNE8Q86YQ8 564 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ABI1Q8IZP0 508 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM143Q96AN5 459 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 TSSK1BQ9BXA7 367 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-202ENST00000379826 KCND2Q9NZV8 630 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 ANGPTL2Q9UKU9 493 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 TBX20Q9UMR3 447 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CHMP2BQ9UQN3 213 aa12.01□□□□□ -0.49
SMAD9-202ENST00000379826 CBX6O95503 412 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 GH1P01241 217 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ETS1P14921 441 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 POLR2BP30876 1174 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 BIRC2Q13490 618 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 LRRC36Q1X8D7 754 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 KLHL38Q2WGJ6 581 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 C1orf146Q5VVC0 180 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 NXNQ6DKJ4 435 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 C1orf186Q6ZWK4 172 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
SMAD9-202ENST00000379826 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 C10orf88Q9H8K7 445 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 SIX2Q9NPC8 291 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.492e-7■■■■■ 28
SMAD9-202ENST00000379826 HEY1Q9Y5J3 304 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 H0YCG3 227 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 BANF1O75531 89 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 UBTFL6P0CB48 400 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 CHADLQ6NUI6 762 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 BATF3Q9NR55 127 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 PCDHA2Q9Y5H9 948 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 ZHX2Q9Y6X8 837 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 PIAS1O75925 651 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 NUDT17P0C025 328 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 EPHB2P29323 1055 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 CENPCQ03188 943 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 CLEC16AQ2KHT3 1053 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 RGS9BPQ6ZS82 235 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 SLC7A3Q8WY07 619 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 FAM81BQ96LP2 452 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 XPO7Q9UIA9 1087 aaKnown RBP12□□□□□ -0.49
SMAD9-202ENST00000379826 RASSF9O75901 435 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 HYIQ5T013 277 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 C3orf62Q6ZUJ4 267 aa12□□□□□ -0.49
SMAD9-202ENST00000379826 RCOR2Q8IZ40 523 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms