RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CCDC137Q6PK04 289 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 MCEEQ96PE7 176 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 TARS2Q9BW92 718 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
LINC00654-201ENST00000379053 APEX2Q9UBZ4 518 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 CAPN11Q9UMQ6 739 aa11.48□□□□□ -0.57
LINC00654-201ENST00000379053 EGFRP00533 1210 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ICAM1P05362 532 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CSF1RP07333 972 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 EFHC1Q5JVL4 640 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NUDCD3Q8IVD9 361 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 UBA3Q8TBC4 463 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NAF1Q96HR8 494 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 GOLPH3LQ9H4A5 285 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 EML4Q9HC35 981 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 OLFML3Q9NRN5 406 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NCK2O43639 380 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ARIH2O95376 493 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 DNAJB2P25686 324 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 P3H1Q32P28 736 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CES5AQ6NT32 575 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 GYS1P13807 737 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 EPB42P16452 691 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 AGR3Q8TD06 166 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 PTPRN2Q92932 1015 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 PARD6BQ9BYG5 372 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 LZTS3O60299 673 aaPredicted RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 SUPT3HO75486 399 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 DCTN3O75935 186 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 AVPR1AP37288 418 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 RGS4P49798 205 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 MTFR1Q15390 333 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF484Q5JVG2 852 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 SNX31Q8N9S9 440 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CYTH2Q99418 400 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ADA2Q9NZK5 511 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF521Q96K83 1311 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 TECPR2O15040 1411 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 EXTL3O43909 919 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ITGB3P05106 788 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 APRTP07741 180 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 SEMA3FQ13275 785 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 E2F4Q16254 413 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CTXN3Q4LDR2 81 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 MFSD4BQ5TF39 518 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 PDXDC1Q6P996 788 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 RCOR2Q8IZ40 523 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
LINC00654-201ENST00000379053 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 ZNF263O14978 683 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 SYNCRIPO60506 623 aaKnown RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 PMS2P54278 862 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 POLD3Q15054 466 aaPredicted RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 AAK1Q2M2I8 961 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 RDM1Q8NG50 284 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 FAM129AQ9BZQ8 928 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 MRPL40Q9NQ50 206 aaKnown RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 KPNA6O60684 536 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 EFCAB14O75071 495 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 MMEP08473 750 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 FMO5P49326 533 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 DPYDQ12882 1025 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 ZC2HC1CQ53FD0 456 aaPredicted RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 ACER1Q8TDN7 264 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 FBXO32Q969P5 355 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 ING2Q9H160 280 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 SMYD3Q9H7B4 428 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 CRLS1Q9UJA2 301 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 AMHP03971 560 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 BLVRAP53004 296 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 AMHR2Q16671 573 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 ZRANB3Q5FWF4 1079 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 MIB1Q86YT6 1006 aa11.46□□□□□ -0.57
LINC00654-201ENST00000379053 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
LINC00654-201ENST00000379053 IPMKQ8NFU5 416 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms