RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 OTOAQ7RTW8 1153 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 LCA5Q86VQ0 697 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RHOT1Q8IXI2 618 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 NME8Q8N427 588 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 GRAPLQ8TC17 118 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 IRGQQ8WZA9 623 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 PCDHB18PQ96TA0 734 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 ZWILCHQ9H900 591 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 ATXN10Q9UBB4 475 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 KCNG1Q9UIX4 513 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SORCS3Q9UPU3 1222 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 TBC1D30Q9Y2I9 924 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RSPH10B2B2RC85 870 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 MSH4O15457 936 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RSPH10BP0C881 870 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 CA4P22748 312 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 TM4SF1P30408 202 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 ADSSP30520 456 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 GPC3P51654 580 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 CDK16Q00536 496 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RCN1Q15293 331 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SEPT7Q16181 437 aaKnown RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 DPY19L2Q6NUT2 758 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 TMPRSS6Q8IU80 811 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SYCP3Q8IZU3 236 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 RAB3IL1Q8TBN0 382 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 C1orf54Q8WWF1 131 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 OPTNQ96CV9 577 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 DDX27Q96GQ7 796 aaKnown RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SIKE1Q9BRV8 207 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 ASCC2Q9H1I8 757 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-203ENST00000378778 BTG4Q9NY30 223 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 SERPINB13Q9UIV8 391 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 EMSYQ7Z589 1322 aa8.68□□□□□ -1.02
PTPRR-203ENST00000378778 CIB2O75838 187 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 PROSCO94903 275 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SETSIPP0DME0 302 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CETPP11597 493 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 AKR1B1P15121 316 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 KRT15P19012 456 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GCAP28676 217 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CRABP2P29373 138 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 NMT1P30419 496 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MXI1P50539 228 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 PRELPP51888 382 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GEMIN4P57678 1058 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 DLGAP5Q15398 846 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 DBN1Q16643 649 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 AOC3Q16853 763 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 KHDC1Q4VXA5 237 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 LIN9Q5TKA1 542 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC38Q5VT99 294 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 DPP8Q6V1X1 898 aaPredicted RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ST13P4Q8IZP2 240 aaPredicted RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC47Q8N1G4 583 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 OGFOD1Q8N543 542 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 XXYLT1Q8NBI6 393 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SUPT20HQ8NEM7 779 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 B4GALNT2Q8NHY0 566 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TTC8Q8TAM2 541 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CCDC110Q8TBZ0 833 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ARHGEF1Q92888 912 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SLC5A5Q92911 643 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SKA1Q96BD8 255 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 DHRS4Q9BTZ2 278 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 C1orf21Q9H246 121 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MRPL47Q9HD33 250 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CAPN9O14815 690 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TOM1O60784 492 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ENTPD5O75356 428 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 HLA-DOAP06340 250 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TRIM49P0CI25 452 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TRIM49CP0CI26 452 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 RARBP10826 455 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CYP11B1P15538 503 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CDC25CP30307 473 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CYP2J2P51589 502 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ARFIP2P53365 341 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 AP2B1P63010 937 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MAP7Q14244 749 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 KRT39Q6A163 491 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ADGRD1Q6QNK2 874 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 KYAT3Q6YP21 454 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 RCOR2Q8IZ40 523 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CD209Q9NNX6 404 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 KCNQ5Q9NR82 932 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms