RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 CNGA2Q16280 664 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 ZNF662Q6ZS27 426 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TRIM50Q86XT4 487 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 AGAP3Q96P47 875 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 CEP41Q9BYV8 373 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TBC1D22BQ9NU19 505 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 FAM49BQ9NUQ9 324 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 UVRAGQ9P2Y5 699 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 SOX11P35716 441 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 CDH8P55286 799 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 FASTKD3Q14CZ7 662 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 HSD17B14Q9BPX1 270 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 JPH1Q9HDC5 661 aaPredicted RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 RBP3P10745 1247 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 EIF3EP60228 445 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 GABPAQ06546 454 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 TFDP1Q14186 410 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 GRAMD1BQ3KR37 738 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 SH3BP5LQ7L8J4 393 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 KDELC2Q7Z4H8 507 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 ZDHHC15Q96MV8 337 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 STK32BQ9NY57 414 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 FNDC3AQ9Y2H6 1198 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 PCDHB2Q9Y5E7 798 aa16.3■□□□□ 0.2
PPM1B-204ENST00000378551 CHD2O14647 1828 aaKnown RBP16.3■□□□□ 0.2
PPM1B-204ENST00000378551 DDX3YO15523 660 aaKnown RBP16.29■□□□□ 0.2
PPM1B-204ENST00000378551 DKC1O60832 514 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPM1B-204ENST00000378551 KRT3P12035 628 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 MROH9Q5TGP6 573 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 IVNS1ABPQ9Y6Y0 642 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ZC3H4Q9UPT8 1303 aaKnown RBP16.29■□□□□ 0.2
PPM1B-204ENST00000378551 H3BRJ5 948 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 PRPSAP2O60256 369 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ZBTB7AO95365 584 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 LCA5LO95447 670 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ZCCHC18P0CG32 403 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 CIITAP33076 1130 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 FMO1Q01740 532 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
PPM1B-204ENST00000378551 Q4G0T1 1027 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 MIS18BP1Q6P0N0 1132 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 VPS11Q9H270 941 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 PCMTD2Q9NV79 361 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 GAKO14976 1311 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ENTPD5O75356 428 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 ADRA1DP25100 572 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 TAS2R40P59535 323 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 LMNB2Q03252 620 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 TAF1BQ53T94 588 aaPredicted RBP16.29■□□□□ 0.2
PPM1B-204ENST00000378551 PCGF5Q86SE9 256 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 PIP4K2CQ8TBX8 421 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 PARD3BQ8TEW8 1205 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 DLGAP2Q9P1A6 1054 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 HEY2Q9UBP5 337 aa16.29■□□□□ 0.2
PPM1B-204ENST00000378551 SNX3O60493 162 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 PSMD10O75832 226 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 GBP7Q8N8V2 638 aaPredicted RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 TRIM11Q96F44 468 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 CPSF2Q9P2I0 782 aaKnown RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 PACSIN3Q9UKS6 424 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 KRT76Q01546 638 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 EFTUD2Q15029 972 aaKnown RBP eCLIP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 C1orf146Q5VVC0 180 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 ARID3BQ8IVW6 561 aaPredicted RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 MREGQ8N565 214 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 DNAAF3Q8N9W5 541 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 THTPAQ9BU02 230 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 SCINQ9Y6U3 715 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 KCNN4O15554 427 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 VPS72Q15906 364 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 CYP4X1Q8N118 509 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 ARMC2Q8NEN0 867 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 RBM41Q96IZ5 413 aaKnown RBP16.28■□□□□ 0.2
PPM1B-204ENST00000378551 SCYL1Q96KG9 808 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 SLC12A6Q9UHW9 1150 aa16.28■□□□□ 0.2
PPM1B-204ENST00000378551 VCAM1P19320 739 aa16.27■□□□□ 0.2
PPM1B-204ENST00000378551 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
PPM1B-204ENST00000378551 MCUQ8NE86 351 aa16.27■□□□□ 0.2
PPM1B-204ENST00000378551 MCPH1Q8NEM0 835 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms