RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 LYNP07948 512 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 MAGEA9P43362 315 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 PSMD4P55036 377 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 KYAT1Q16773 422 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 SGO1Q5FBB7 561 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 C16orf89Q6UX73 402 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TAF8Q7Z7C8 310 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 TRPM5Q9NZQ8 1165 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.636e-9■■■■■ 64.2
RTN3-206ENST00000377819 RNF123Q5XPI4 1314 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 MEI4A8MW99 385 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 MPOP05164 745 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 FBLN1P23142 703 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 RPS6P62753 249 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 FBXW10Q5XX13 1052 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CDH24Q86UP0 819 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 ATXN7L3BQ96GX2 97 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 THTPAQ9BU02 230 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 LNPEPQ9UIQ6 1025 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CRLS1Q9UJA2 301 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 SLC39A10Q9ULF5 831 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 ASXL2Q76L83 1435 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 FAM25AB3EWG3 89 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 FAM25CB3EWG5 89 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 FAM25GB3EWG6 89 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 TADA2AO75478 443 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CYP7B1O75881 506 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CHRM3P20309 590 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 POU1F1P28069 291 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 ADORA2BP29275 332 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 S100GP29377 79 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TAP1Q03518 808 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 KLC1Q07866 573 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 RBL2Q08999 1139 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 STX5Q13190 355 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TYW3Q6IPR3 259 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 SKA1Q96BD8 255 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TBC1D22BQ9NU19 505 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 ZNF804BA4D1E1 1349 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 XDHP47989 1333 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 BBOX1O75936 387 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 TNNI3P19429 210 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 NOS3P29474 1203 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 RCVRNP35243 200 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CTSWP56202 376 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 MAGOHP61326 146 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 AMPD2Q01433 879 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 POU4F1Q01851 419 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 DDX39BQ13838 428 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 P3H1Q32P28 736 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 IZUMO1Q8IYV9 350 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 CYP4Z2PQ8N1L4 340 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 MUC3BQ9H195 1237 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 RANBP17Q9H2T7 1088 aaKnown RBP11.11□□□□□ -0.63
RTN3-206ENST00000377819 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 KLHL20Q9Y2M5 609 aa11.11□□□□□ -0.63
RTN3-206ENST00000377819 KLHL2O95198 593 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 GDF11O95390 407 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 IL6P05231 212 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 GRIK1P39086 918 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SLC7A5Q01650 507 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RAET1EQ8TD07 263 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RIN2Q8WYP3 895 aaPredicted RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 MCRS1Q96EZ8 462 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 HIC2Q96JB3 615 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 CCDC3Q9BQI4 270 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 MLXIPLQ9NP71 852 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 VPS51Q9UID3 782 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SOAT2O75908 522 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RPN2P04844 631 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SERPINB9P50453 376 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 CLCN6P51797 869 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 UBE3CQ15386 1083 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 CHSY1Q86X52 802 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RTKN2Q8IZC4 609 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 TRIM39Q9HCM9 518 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 FAM217BQ9NTX9 383 aaPredicted RBP11.1□□□□□ -0.63
RTN3-206ENST00000377819 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 SYNMO15061 1565 aa11.1□□□□□ -0.63
RTN3-206ENST00000377819 ATRXP46100 2492 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms