RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 UBR7Q8N806 425 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF564Q8TBZ8 553 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 RNF19AQ9NV58 838 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 AGAP1Q9UPQ3 857 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 TRPA1O75762 1119 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 SEC31AO94979 1220 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 CYP1A2P05177 515 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 CDH8P55286 799 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 MRPS25P82663 173 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 APBB1IPQ7Z5R6 666 aaPredicted RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 HINFPQ9BQA5 517 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 RBM12Q9NTZ6 932 aaKnown RBP13.8□□□□□ -0.2
TRIM40-206ENST00000376724 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
TRIM40-206ENST00000376724 KPNA6O60684 536 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 CYP1A1P04798 512 aaPredicted RBP13.79□□□□□ -0.2
TRIM40-206ENST00000376724 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
TRIM40-206ENST00000376724 AKAP5P24588 427 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF132P52740 706 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 PDE4CQ08493 712 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 MCOLN2Q8IZK6 566 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 HES6Q96HZ4 224 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 PBKQ96KB5 322 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 SELENOOQ9BVL4 669 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 NXF3Q9H4D5 531 aaKnown RBP13.79□□□□□ -0.2
TRIM40-206ENST00000376724 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF446Q9NWS9 450 aa13.79□□□□□ -0.2
TRIM40-206ENST00000376724 RRM1P23921 792 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 YARSP54577 528 aaKnown RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 HADHBP55084 474 aaKnown RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 ORC1Q13415 861 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 GLRA4Q5JXX5 417 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 ZNF572Q7Z3I7 529 aaPredicted RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 HPDLQ96IR7 371 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 C11orf70Q9BRQ4 267 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 ZMYND10O75800 440 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 VSNL1P62760 191 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 NOMO3P69849 1222 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 CENPCQ03188 943 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 GDF6Q6KF10 455 aaPredicted RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 NME8Q8N427 588 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 CD99L2Q8TCZ2 262 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 ZMAT2Q96NC0 199 aaKnown RBP13.78□□□□□ -0.2
TRIM40-206ENST00000376724 LRRC1Q9BTT6 524 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 GTF2IRD1Q9UHL9 959 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
TRIM40-206ENST00000376724 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
TRIM40-206ENST00000376724 ASGR1P07306 291 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 CTSHP09668 335 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 CD19P15391 556 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 COMTP21964 271 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 HOXC8P31273 242 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 ATICP31939 592 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
TRIM40-206ENST00000376724 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 PCBP1Q15365 356 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRIM40-206ENST00000376724 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 C11orf63Q6NUN7 778 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 TFAP2BQ92481 460 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 ZSWIM1Q9BR11 485 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 CELF4Q9BZC1 486 aaKnown RBP13.77□□□□□ -0.21
TRIM40-206ENST00000376724 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 UPF3AQ9H1J1 476 aaKnown RBP13.77□□□□□ -0.21
TRIM40-206ENST00000376724 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 ADAM22Q9P0K1 906 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 UVRAGQ9P2Y5 699 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 PARP2Q9UGN5 583 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
TRIM40-206ENST00000376724 M0QZ92 97 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 CES2O00748 559 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 ADAMTS4O75173 837 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 RECQL4O94761 1208 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 AXLP30530 894 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 RBP5P82980 135 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 SLC7A5Q01650 507 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 ITIH3Q06033 890 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 KCNA10Q16322 511 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
TRIM40-206ENST00000376724 TAF2Q6P1X5 1199 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 MMS22LQ6ZRQ5 1243 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 MON1BQ7L1V2 547 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 CD302Q8IX05 232 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
TRIM40-206ENST00000376724 CALR3Q96L12 384 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms