RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PLEKHO2Q8TD55 490 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 NELFBQ8WX92 580 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 SENP8Q96LD8 212 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 GZF1Q9H116 711 aaPredicted RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 HCFC2Q9Y5Z7 792 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
HDHD3-202ENST00000374180 KRT13P13646 458 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 LTBRP36941 435 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
HDHD3-202ENST00000374180 DLX2Q07687 328 aaPredicted RBP17.23■□□□□ 0.35
HDHD3-202ENST00000374180 SV2CQ496J9 727 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
HDHD3-202ENST00000374180 TMEM184AQ6ZMB5 413 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 INTS8Q75QN2 995 aaKnown RBP17.23■□□□□ 0.35
HDHD3-202ENST00000374180 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 LRRC52Q8N7C0 313 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 VN1R2Q8NFZ6 395 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 CXorf38Q8TB03 319 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 ZNF560Q96MR9 790 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
HDHD3-202ENST00000374180 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 KPNA7A9QM74 516 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
HDHD3-202ENST00000374180 H7C4K7 107 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 GLP2RO95838 553 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 EPB41P11171 864 aaKnown RBP17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CLCN4P51793 760 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 VAMP7P51809 220 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 AP3M2P53677 418 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 DLG4P78352 724 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CLDN10P78369 228 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 TFF2Q03403 129 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 KCNC3Q14003 757 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 AAK1Q2M2I8 961 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 PALB2Q86YC2 1186 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 MLKLQ8NB16 471 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 SLC22A17Q8WUG5 538 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CASP10Q92851 521 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CLSTN3Q9BQT9 956 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 MKNK1Q9BUB5 465 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 MTRRQ9UBK8 725 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 BARX2Q9UMQ3 279 aaPredicted RBP17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
HDHD3-202ENST00000374180 BACE2Q9Y5Z0 518 aa17.22■□□□□ 0.35
HDHD3-202ENST00000374180 CYB561D2O14569 222 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 IKBKBO14920 756 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 PHACTR2O75167 634 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 TBX10O75333 385 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 ODC1P11926 461 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 EPCAMP16422 314 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 OR1D2P34982 312 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
HDHD3-202ENST00000374180 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
HDHD3-202ENST00000374180 BFSP1Q12934 665 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 PAK1Q13153 545 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 MRPL58Q14197 206 aaKnown RBP17.21■□□□□ 0.35
HDHD3-202ENST00000374180 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDHD3-202ENST00000374180 CLEC1BQ9P126 229 aa17.21■□□□□ 0.35
HDHD3-202ENST00000374180 SCN1AP35498 2009 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 GLUD1P00367 558 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
HDHD3-202ENST00000374180 TYMPP19971 482 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 STX17P56962 302 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 BIRC3Q13489 604 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 TRPC3Q13507 836 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 CTXN3Q4LDR2 81 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 FOXR2Q6PJQ5 311 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
HDHD3-202ENST00000374180 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 HPDLQ96IR7 371 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 DUSP9Q99956 384 aaKnown RBP17.2■□□□□ 0.34
HDHD3-202ENST00000374180 DPP7Q9UHL4 492 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 DSEQ9UL01 958 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 CDY1Q9Y6F8 540 aa17.2■□□□□ 0.34
HDHD3-202ENST00000374180 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
HDHD3-202ENST00000374180 ADAM12O43184 909 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 TGM5O43548 720 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 OAZ2O95190 189 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 C1RP00736 705 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
HDHD3-202ENST00000374180 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 ENPEPQ07075 957 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 RAB33AQ14088 237 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 CLUL1Q15846 466 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 LEXMQ3ZCV2 418 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
HDHD3-202ENST00000374180 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 ZNF280DQ6N043 979 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms