RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 PON1P27169 355 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 GTF2H1P32780 548 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 GUCY2DQ02846 1103 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 NME8Q8N427 588 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 CHMP6Q96FZ7 201 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 DDX23Q9BUQ8 820 aaKnown RBP10.63□□□□□ -0.71
KDM4A-201ENST00000372396 TAF1DQ9H5J8 278 aaPredicted RBP10.63□□□□□ -0.71
KDM4A-201ENST00000372396 PDP2Q9P2J9 529 aa10.63□□□□□ -0.71
KDM4A-201ENST00000372396 CCDC166P0CW27 439 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TMED10P49755 219 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 P3H1Q32P28 736 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TMEM35BQ8NCS4 154 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 OLFM3Q96PB7 478 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 GPRC5CQ9NQ84 441 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 LYPLA2O95372 231 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CD58P19256 250 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 PDE1CQ14123 709 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SESTD1Q86VW0 696 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 IQCF2Q8IXL9 164 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 C12orf42Q96LP6 360 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 UBE2OQ9C0C9 1292 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CNOT10Q9H9A5 744 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CNOT8Q9UFF9 292 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SUN1O94901 812 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ITGB5P18084 799 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ATP5DP30049 168 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CASP4P49662 377 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ARPC4P59998 168 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CEP70Q8NHQ1 597 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 CASP10Q92851 521 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SHISA4Q96DD7 197 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 PPP1R16BQ96T49 567 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SENP7Q9BQF6 1050 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 APOL6Q9BWW8 343 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 PRMT7Q9NVM4 692 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SNX12Q9UMY4 172 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 H0Y3Z8 333 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TFRCP02786 760 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 FTLP02792 175 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ATP1A1P05023 1023 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 SERPINB3P29508 390 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 HUNKP57058 714 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF484Q5JVG2 852 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 MFSD14CQ5VZR4 134 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 THOC7Q6I9Y2 204 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TMEM270Q6UE05 265 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 TRIM50Q86XT4 487 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 NLGN2Q8NFZ4 835 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 RUBCNQ92622 972 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 EIF2AQ9BY44 585 aaKnown RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 FAM192AQ9GZU8 254 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 IFT122Q9HBG6 1241 aa10.62□□□□□ -0.71
KDM4A-201ENST00000372396 COL5A3P25940 1745 aaPredicted RBP10.62□□□□□ -0.71
KDM4A-201ENST00000372396 FAM170AA1A519 330 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 SPDYE5A6NIY4 337 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 SRRM3A6NNA2 597 aaPredicted RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 HNRNPRO43390 633 aaKnown RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 CALB1P05937 261 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 LMNB2Q03252 620 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 TMEM132BQ14DG7 1078 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 BMT2Q1RMZ1 405 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 TTMPQ5BVD1 217 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF554Q86TJ5 538 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ST13P4Q8IZP2 240 aaPredicted RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 MAGOHBQ96A72 148 aaKnown RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 STOML1Q9UBI4 398 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 SYNGAP1Q96PV0 1343 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 TNPO2O14787 897 aaKnown RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 PPP2R2AP63151 447 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 RNF220Q5VTB9 566 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 NCCRP1Q6ZVX7 275 aaPredicted RBP10.61□□□□□ -0.71
KDM4A-201ENST00000372396 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 SNX25Q9H3E2 840 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ZFYVE28Q9HCC9 887 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 PLAAQ9Y263 795 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ZNF831Q5JPB2 1677 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 TLDC2A0PJX2 215 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 STRNO43815 780 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 C4AP0C0L4 1744 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 USP46P62068 366 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 CACNA1SQ13698 1873 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 ECM1Q16610 540 aa10.61□□□□□ -0.71
KDM4A-201ENST00000372396 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms