RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CAND2O75155 1236 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 PGK2P07205 417 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 RAD23BP54727 409 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 ACTR2P61160 394 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 CDK17Q00537 523 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 SP110Q9HB58 689 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 SYTL2Q9HCH5 934 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 REREQ9P2R6 1566 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 ESYT3A0FGR9 886 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 THPOP40225 353 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 DDR1Q08345 913 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 RGS9BPQ6ZS82 235 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 GMCL1Q96IK5 515 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 HEY1Q9Y5J3 304 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 CDC40O60508 579 aaKnown RBP eCLIP14□□□□□ -0.17
RAPGEF1-201ENST00000372189 CCZ1BP86790 482 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 CCZ1P86791 482 aaPredicted RBP14□□□□□ -0.17
RAPGEF1-201ENST00000372189 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 MSL3Q8N5Y2 521 aaKnown RBP14□□□□□ -0.17
RAPGEF1-201ENST00000372189 DCDC2Q9UHG0 476 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 APOA1P02647 267 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SCRN3Q0VDG4 424 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TAF1BQ53T94 588 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 NDE1Q9NXR1 346 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 PCSK1NQ9UHG2 260 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ATP11BQ9Y2G3 1177 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 FOXN1O15353 648 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ARFIP2P53365 341 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TAP1Q03518 808 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TUBA3CQ13748 450 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SV2CQ496J9 727 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 NVLO15381 856 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 CHEK2O96017 543 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 CYBBP04839 570 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TAC1P20366 129 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 MDH1P40925 334 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNX17Q15036 470 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 STILQ15468 1287 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ACAD11Q709F0 780 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 GLIS2Q9BZE0 524 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRIM33Q9UPN9 1127 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 FTLP02792 175 aaPredicted RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 MSR1P21757 451 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 OR1G1P47890 313 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 DHX34Q14147 1143 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 PCSK9Q8NBP7 692 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SPATA4Q8NEY3 305 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 KAZALD1Q96I82 304 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 DDX47Q9H0S4 455 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ABCF3Q9NUQ8 709 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 FBXL5Q9UKA1 691 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 KPNA7A9QM74 516 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 PRRG1O14668 218 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 PPP1R37O75864 691 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■■□ 26.2
RAPGEF1-201ENST00000372189 OCRLQ01968 901 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 LAMB3Q13751 1172 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNRNP35Q16560 246 aaKnown RBP13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 ANO5Q75V66 913 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 TJP2Q9UDY2 1190 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
RAPGEF1-201ENST00000372189 H3BRJ5 948 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 CXCL11O14625 94 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 NPTXRO95502 500 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 STAG3L1P0CL83 205 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 LRIG3Q6UXM1 1119 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DPF3Q92784 378 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 RPA1P27694 616 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 FKBP1AP62942 108 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 GUCY1A3Q02108 690 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 CACNB2Q08289 660 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRR1Q13601 381 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SLC12A1Q13621 1099 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZNF473Q8WTR7 871 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNF8Q96H20 258 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 CYP26B1Q9NR63 512 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 AAASQ9NRG9 546 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 EHD2Q9NZN4 543 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SSTR3P32745 418 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 DCP1BQ8IZD4 617 aaKnown RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 POLR3CQ9BUI4 534 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 HEMGNQ9BXL5 484 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 SIK2Q9H0K1 926 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 PRELID1Q9Y255 219 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAM205AQ6ZU69 1335 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 WNT10BO00744 389 aa13.98□□□□□ -0.17
RAPGEF1-201ENST00000372189 EIF3HO15372 352 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■■ 27.8
RAPGEF1-201ENST00000372189 ESRRBO95718 433 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms