RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 RIT2Q99578 217 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ZNF577Q9BSK1 485 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ARHGAP39Q9C0H5 1083 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 NUP62CLQ9H1M0 184 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 MAPRE3Q9UPY8 281 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 MRPS23Q9Y3D9 190 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 PLXNB2O15031 1838 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 A0A1W2PQU0 124 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 SYCE3A1L190 88 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 SLC15A5A6NIM6 579 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 IPO5O00410 1097 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 CAND2O75155 1236 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 MED24O75448 989 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 TBC1D8O95759 1140 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 SNAI1O95863 264 aaPredicted RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 CCNE2O96020 404 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 PGRP06401 933 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KCNA2P16389 499 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 PLCG1P19174 1290 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 CASP1P29466 404 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ICAM3P32942 547 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 UBA7P41226 1012 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 STRN3Q13033 797 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 GRB14Q14449 540 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ZRSR1Q15695 479 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 TMEM266Q2M3C6 531 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 TMEM63BQ5T3F8 832 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 LRCH2Q5VUJ6 765 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 NCAPH2Q6IBW4 605 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 RBM43Q6ZSC3 357 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 SEPT14Q6ZU15 432 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KCNK18Q7Z418 384 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 GAS2L3Q86XJ1 694 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KCT2Q8NC54 265 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 HRASLS5Q96KN8 279 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 AK8Q96MA6 479 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 FOXQ1Q9C009 403 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 PRDM5Q9NQX1 630 aaPredicted RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 PDGFCQ9NRA1 345 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 RNF186Q9NXI6 227 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ADD3Q9UEY8 706 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 GTF2IRD1Q9UHL9 959 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 GJD2Q9UKL4 321 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KIAA1217Q5T5P2 1943 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 MCM3APO60318 1980 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CCDC189A1A4V9 331 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 DDX39AO00148 427 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 MAFGO15525 162 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 GAS7O60861 476 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 KINO60870 393 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 STAM2O75886 525 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ARIH2O95376 493 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 MAP2K2P36507 400 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CCT6AP40227 531 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 GRIA2P42262 883 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ZNF445P59923 1031 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PSMC6P62333 389 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SETQ01105 290 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 PPP2R5CQ13362 524 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PNOCQ13519 176 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PCBP1Q15365 356 aaKnown RBP eCLIP3.94□□□□□ -1.78
MCF2-202ENST00000370573 NKPD1Q17RQ9 610 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TMEM119Q4V9L6 283 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 HYIQ5T013 277 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CDKAL1Q5VV42 579 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 RRAGBQ5VZM2 374 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 KRT79Q5XKE5 535 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SCARA3Q6AZY7 606 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 MAMDC4Q6UXC1 1216 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CDH24Q86UP0 819 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 NLRX1Q86UT6 975 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CATSPER3Q86XQ3 398 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 HID1Q8IV36 788 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CHPFQ8IZ52 775 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 IQUBQ8NA54 791 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 AGBL5Q8NDL9 886 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 STAMQ92783 540 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PAGE5Q96GU1 130 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 MAML3Q96JK9 1138 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 HSD17B14Q9BPX1 270 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ARPC5LQ9BPX5 153 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SDF4Q9BRK5 362 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 FUCA2Q9BTY2 467 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 DHRS4Q9BTZ2 278 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TEKT3Q9BXF9 490 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 KATNBL1Q9H079 304 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TNMDQ9H2S6 317 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 BLOC1S4Q9NUP1 217 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 RGL1Q9NZL6 768 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 FLRT1Q9NZU1 646 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ADAMTS6Q9UKP5 1117 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PCNTO95613 3336 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PLXNA1Q9UIW2 1896 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 LRRC37A2A6NM11 1700 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ZSWIM8A7E2V4 1837 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ASB14A6NK59 587 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SLC22A31A6NKX4 558 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 E9PMD0 336 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PLD2O14939 933 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms