RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 GOLGA7BQ2TAP0 167 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 MAP3K21Q5TCX8 1036 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 TBC1D1Q86TI0 1168 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-203ENST00000368207 IL17RAQ96F46 866 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 EPAS1Q99814 870 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
PTPRK-203ENST00000368207 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-203ENST00000368207 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
PTPRK-203ENST00000368207 GMNCA6NCL1 334 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 HSPA4LO95757 839 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 HMBSP08397 361 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 RBP3P10745 1247 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 CPT1AP50416 773 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 CYP24A1Q07973 514 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 DGKZQ13574 1117 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 MPZL3Q6UWV2 235 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 ZNF677Q86XU0 584 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 ZNF507Q8TCN5 953 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 SP110Q9HB58 689 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 DPP3Q9NY33 737 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 DBR1Q9UK59 544 aaKnown RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 ESRRAP11474 423 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 MYL6P60660 151 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 NR1H3Q13133 447 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 GLB1LQ6UWU2 654 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 DNERQ8NFT8 737 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 SPATA18Q8TC71 538 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 PGBD4Q96DM1 585 aa12.96□□□□□ -0.34
PTPRK-203ENST00000368207 PPARGC1AQ9UBK2 798 aaKnown RBP12.96□□□□□ -0.34
PTPRK-203ENST00000368207 TISP43B9A030 160 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 INSRRP14616 1297 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 PAMP19021 973 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 DBN1Q16643 649 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 SLC47A2Q86VL8 602 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 SLC35C1Q96A29 364 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 CYFIP2Q96F07 1278 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 CARD9Q9H257 536 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 ALG13Q9NP73 1137 aaKnown RBP12.95□□□□□ -0.34
PTPRK-203ENST00000368207 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 INTUQ9ULD6 942 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 PDHXO00330 501 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 KITP10721 976 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 RRM1P23921 792 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 CASP2P42575 452 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 HSD17B4P51659 736 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 POU5F1BQ06416 359 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 SNCBQ16143 134 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 IL17AQ16552 155 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 KYNUQ16719 465 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 USP33Q8TEY7 942 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 TATDN2Q93075 761 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
PTPRK-203ENST00000368207 HPCAL4Q9UM19 191 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 SLIT3O75094 1523 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 CYP2C19P33261 490 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 OR1G1P47890 313 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 DEUP1Q05D60 604 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 ITPRIPL1Q6GPH6 555 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 KLC3Q6P597 504 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 ACOT1Q86TX2 421 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 MED15Q96RN5 788 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 PNKPQ96T60 521 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 ERP44Q9BS26 406 aa12.95□□□□□ -0.34
PTPRK-203ENST00000368207 PPP1R12AO14974 1030 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CFLARO15519 480 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 MAP3K6O95382 1288 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 THPOP40225 353 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CASP5P51878 434 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 FUT2Q10981 343 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 VGLL4Q14135 290 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 SV2CQ496J9 727 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 ANKRD7Q92527 254 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 OSMRQ99650 979 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CXCL11O14625 94 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 MAPK13O15264 365 aa12.94□□□□□ -0.34
PTPRK-203ENST00000368207 WDR75Q8IWA0 830 aaKnown RBP12.94□□□□□ -0.34
PTPRK-203ENST00000368207 CCNYL1Q8N7R7 359 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms