RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 MLH1P40692 756 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 NRIP1P48552 1158 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 VCPP55072 806 aaKnown RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 WNT7BP56706 349 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 ERVFC1P60507 584 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 PPP3CAQ08209 521 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 TRPC3Q13507 836 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 BTG3Q14201 252 aaPredicted RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 PTPROQ16827 1216 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 SLC10A6Q3KNW5 377 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 C1orf220Q5T0J3 134 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 TDRD10Q5VZ19 366 aaKnown RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 LMBRD2Q68DH5 695 aaPredicted RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 JADE1Q6IE81 842 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 GLB1LQ6UWU2 654 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMC6Q7Z403 805 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 ECHDC2Q86YB7 292 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 ADHFE1Q8IWW8 467 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 EFCAB13Q8IY85 973 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 KLHL23Q8NBE8 558 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 RNF169Q8NCN4 708 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 BEST2Q8NFU1 509 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 VN1R2Q8NFZ6 395 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 NEK11Q8NG66 645 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 PLEKHO2Q8TD55 490 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 RSPH1Q8WYR4 309 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 RPGRIP1Q96KN7 1286 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 POP1Q99575 1024 aaKnown RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 LSM14BQ9BX40 385 aaKnown RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 INTS2Q9H0H0 1204 aaKnown RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 RSAD1Q9HA92 442 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 FAM207AQ9NSI2 230 aaPredicted RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 SLC38A7Q9NVC3 462 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 IMPACTQ9P2X3 320 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 ITGA11Q9UKX5 1188 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 DAAM1Q9Y4D1 1078 aa7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 PTPRZ1P23471 2315 aaPredicted RBP7.3□□□□□ -1.24
RNU1-55P-201ENST00000365510 PTPRJQ12913 1337 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZFHX2Q9C0A1 2572 aaPredicted RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 CITO14578 2027 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TTC3P53804 2025 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZDBF2Q9HCK1 2354 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMEM221A6NGB7 291 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 C9IYK1 514 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 M0R296 226 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZC3H11AO75152 810 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 GLP2RO95838 553 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 EOMESO95936 686 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 C4BPAP04003 597 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 WEE2P0C1S8 567 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 KCNE1P15382 129 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ATF7P17544 494 aaPredicted RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PON1P27169 355 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 GSDMDP57764 484 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TCF15Q12870 199 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 GRIK3Q13003 919 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 NCOA4Q13772 614 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 COL19A1Q14993 1142 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 SMAD2Q15796 467 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZACNQ401N2 412 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 XKR4Q5GH76 650 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 WDR44Q5JSH3 913 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 GLRA4Q5JXX5 417 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TRIM65Q6PJ69 517 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ALKAL1Q6UXT8 129 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 C15orf39Q6ZRI6 1047 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 SV2AQ7L0J3 742 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 MRPL10Q7Z7H8 261 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PPFIBP1Q86W92 1011 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 CNGA4Q8IV77 575 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ABI1Q8IZP0 508 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 SPC24Q8NBT2 197 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 OR5B17Q8NGF7 314 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 URGCPQ8TCY9 931 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TAS1R2Q8TE23 839 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 POF1BQ8WVV4 589 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 LPPQ93052 612 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ZNF689Q96CS4 500 aaPredicted RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PDLIM2Q96JY6 352 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 GAD1Q99259 594 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 CRACR2AQ9BSW2 395 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ELAC1Q9H777 363 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PLCB1Q9NQ66 1216 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 RAB20Q9NX57 234 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 TMEM161AQ9NX61 479 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 KLK14Q9P0G3 267 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 APEX2Q9UBZ4 518 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 CD207Q9UJ71 328 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 UBQLN1Q9UMX0 589 aaKnown RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 SIK3Q9Y2K2 1263 aa7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
RNU1-55P-201ENST00000365510 PCDHB7Q9Y5E2 793 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms