RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 YME1L1Q96TA2 773 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 SMYD3Q9H7B4 428 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 NLRC4Q9NPP4 1024 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 SLC38A7Q9NVC3 462 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 MARCH5Q9NX47 278 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 NXF1Q9UBU9 619 aaKnown RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 NME7Q9Y5B8 376 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 NRP1O14786 923 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 B3GAT3O94766 335 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 WEE2P0C1S8 567 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 UCHL3P15374 230 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 PBX2P40425 430 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 OR1G1P47890 313 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 POLR2FP61218 127 aaKnown RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 ZNF699Q32M78 642 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 BAP1Q92560 729 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 VN1R3Q9BXE9 311 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 UBE2TQ9NPD8 197 aaPredicted RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 PLCB1Q9NQ66 1216 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 KANSL3Q9P2N6 904 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 APEX2Q9UBZ4 518 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 MYO7AQ13402 2215 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 HOXA2O43364 376 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 CASP14P31944 242 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 CDR1P51861 262 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 BCAR1P56945 870 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 BTG3Q14201 252 aaPredicted RBP11.56□□□□□ -0.56
SNX6-201ENST00000362031 SGSM1Q2NKQ1 1148 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 TAS1R1Q7RTX1 841 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 LRRC43Q8N309 656 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 PPM1KQ8N3J5 372 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 B3GALT6Q96L58 329 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 DNAJC12Q9UKB3 198 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 TIMM13Q9Y5L4 95 aaPredicted RBP11.56□□□□□ -0.56
SNX6-201ENST00000362031 SNX9Q9Y5X1 595 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 GBF1Q92538 1859 aa11.56□□□□□ -0.56
SNX6-201ENST00000362031 ITIH6Q6UXX5 1313 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 KPNA7A9QM74 516 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 ACO1P21399 889 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 RPL9P32969 192 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 ADKP55263 362 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 PDE4CQ08493 712 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 ARHGAP44Q17R89 818 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 SOWAHAQ2M3V2 549 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 LRRC52Q8N7C0 313 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 PDLIM2Q96JY6 352 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 SLC9A7Q96T83 725 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 ZBED2Q9BTP6 218 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 GPR62Q9BZJ7 368 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 VRTNQ9H8Y1 702 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 HMGXB4Q9UGU5 601 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 FOXN3O00409 490 aaPredicted RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 TLL1O43897 1013 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 CLSTN1O94985 981 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 CDC25BP30305 580 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX6-201ENST00000362031 TAF6P49848 677 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 JAM2P57087 298 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 CETN1Q12798 172 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 ORC1Q13415 861 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 CUL2Q13617 745 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 CCDC142Q17RM4 750 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 LIMS2Q7Z4I7 341 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 CMTR2Q8IYT2 770 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 UBR7Q8N806 425 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 NEK11Q8NG66 645 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 PHOSPHO2Q8TCD6 241 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 KBTBD7Q8WVZ9 684 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 NT5C1BQ96P26 610 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 TWNKQ96RR1 684 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 RAD9AQ99638 391 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 LPIN3Q9BQK8 851 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 MRPL45Q9BRJ2 306 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 MRPL9Q9BYD2 267 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 PRO3102Q9H379 93 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
SNX6-201ENST00000362031 YBX2Q9Y2T7 364 aaKnown RBP11.55□□□□□ -0.56
SNX6-201ENST00000362031 PRUNE2Q8WUY3 3088 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 STAU1O95793 577 aaKnown RBP11.54□□□□□ -0.56
SNX6-201ENST00000362031 ALDH2P05091 517 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 TPM3P06753 285 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 CD58P19256 250 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 ATICP31939 592 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 RAPGEF1Q13905 1077 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 DRAP1Q14919 205 aaPredicted RBP11.54□□□□□ -0.56
SNX6-201ENST00000362031 ZNF667Q5HYK9 610 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 WDR44Q5JSH3 913 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 DCLRE1AQ6PJP8 1040 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 KCNT2Q6UVM3 1135 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms