RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HELQQ8TDG4 1101 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 TAF4BQ92750 862 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 FAM81BQ96LP2 452 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.18■■□□□ 1.14
SHISA4-201ENST00000362011 DNAJC12Q9UKB3 198 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 PLAGL2Q9UPG8 496 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 AGAP1Q9UPQ3 857 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 INPP5FQ9Y2H2 1132 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 SLC4A7Q9Y6M7 1214 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 RNF225M0QZC1 329 aaPredicted RBP22.17■■□□□ 1.14
SHISA4-201ENST00000362011 HOXA2O43364 376 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 POU3F3P20264 500 aaPredicted RBP22.17■■□□□ 1.14
SHISA4-201ENST00000362011 COL9A1P20849 921 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 ADKP55263 362 aaKnown RBP22.17■■□□□ 1.14
SHISA4-201ENST00000362011 ZNF699Q32M78 642 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 CLLU1OSQ5K130 101 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 SCARA3Q6AZY7 606 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 TMEM130Q8N3G9 435 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 PPM1KQ8N3J5 372 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 TC2NQ8N9U0 490 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 CXorf38Q8TB03 319 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 ADAMTS19Q8TE59 1207 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 BAP1Q92560 729 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 TATDN2Q93075 761 aa22.17■■□□□ 1.14
SHISA4-201ENST00000362011 NAA15Q9BXJ9 866 aaKnown RBP22.17■■□□□ 1.14
SHISA4-201ENST00000362011 UBE2TQ9NPD8 197 aaPredicted RBP22.17■■□□□ 1.14
SHISA4-201ENST00000362011 MYO9BQ13459 2157 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 POMCP01189 267 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 FGFR1P11362 822 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 IGFBP4P22692 258 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 LRPAP1P30533 357 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 AFF1P51825 1210 aaKnown RBP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 RABGGTBP53611 331 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 MFAP3P55082 362 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 SOX4Q06945 474 aaPredicted RBP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 RAPGEF1Q13905 1077 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 CCDC85BQ15834 202 aaPredicted RBP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 NOMO2Q5JPE7 1267 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 SPOPLQ6IQ16 392 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 PDXDC1Q6P996 788 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 ABI1Q8IZP0 508 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 SPAG5Q96R06 1193 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 NUCKS1Q9H1E3 243 aaKnown RBP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 AJAP1Q9UKB5 411 aaPredicted RBP22.16■■□□□ 1.14
SHISA4-201ENST00000362011 MYO6Q9UM54 1294 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 TSC2P49815 1807 aa22.16■■□□□ 1.14
SHISA4-201ENST00000362011 ANO9A1A5B4 782 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 BAIAP3O94812 1187 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 STAU1O95793 577 aaKnown RBP22.15■■□□□ 1.14
SHISA4-201ENST00000362011 MYOGP15173 224 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 ARID5BQ14865 1188 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 NAB2Q15742 525 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 C9orf57Q5W0N0 161 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 RRAGAQ7L523 313 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 ENOSF1Q7L5Y1 443 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 LRRC52Q8N7C0 313 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 OR8K1Q8NGG5 319 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 RSPH1Q8WYR4 309 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 ELMO3Q96BJ8 720 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 ZNF560Q96MR9 790 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 PANX2Q96RD6 677 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 XYLT2Q9H1B5 865 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 VRTNQ9H8Y1 702 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 GOLGA2P5Q9HBQ8 144 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 APOBEC3GQ9HC16 384 aaKnown RBP22.15■■□□□ 1.14
SHISA4-201ENST00000362011 KANSL3Q9P2N6 904 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 NUB1Q9Y5A7 615 aa22.15■■□□□ 1.14
SHISA4-201ENST00000362011 AMHP03971 560 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 TBXAS1P24557 533 aaPredicted RBP22.14■■□□□ 1.14
SHISA4-201ENST00000362011 GCNT1Q02742 428 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 MYO1EQ12965 1108 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 DRAP1Q14919 205 aaPredicted RBP22.14■■□□□ 1.14
SHISA4-201ENST00000362011 ARHGAP44Q17R89 818 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 TSR1Q2NL82 804 aaKnown RBP22.14■■□□□ 1.14
SHISA4-201ENST00000362011 ZNF667Q5HYK9 610 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 PPP2R2DQ66LE6 453 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 HPDLQ96IR7 371 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 UHRF1Q96T88 793 aaPredicted RBP22.14■■□□□ 1.14
SHISA4-201ENST00000362011 STK33Q9BYT3 514 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 NIF3L1Q9GZT8 377 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 ABHD10Q9NUJ1 306 aa22.14■■□□□ 1.14
SHISA4-201ENST00000362011 REV3LO60673 3130 aa22.14■■□□□ 1.13
SHISA4-201ENST00000362011 XIRP2A4UGR9 3374 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 LRRC53A6NM62 1247 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 PIRO00625 290 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 BMP1P13497 986 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 ATP2A2P16615 1042 aaKnown RBP22.13■■□□□ 1.13
SHISA4-201ENST00000362011 PNPLA4P41247 253 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 JAM2P57087 298 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 TUSC3Q13454 348 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 LRRC8AQ8IWT6 810 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 CRIPAKQ8N1N5 446 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 KAT5Q92993 513 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 FAXDC2Q96IV6 333 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 KREMEN1Q96MU8 473 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 DNAJC7Q99615 494 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 COL4A6Q14031 1691 aa22.13■■□□□ 1.13
SHISA4-201ENST00000362011 NLRC5Q86WI3 1866 aa22.12■■□□□ 1.13
SHISA4-201ENST00000362011 PPEF2O14830 753 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms