RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DCLRE1AQ6PJP8 1040 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 TSC2P49815 1807 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-202ENST00000357475 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-202ENST00000357475 CBFA2T2O43439 604 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 TAF6P49848 677 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 TIGD5Q53EQ6 642 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 KAT5Q92993 513 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 ARID3AQ99856 593 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 FAM207AQ9NSI2 230 aaPredicted RBP27.28■■□□□ 1.96
SSBP3-202ENST00000357475 NXF1Q9UBU9 619 aaKnown RBP27.28■■□□□ 1.96
SSBP3-202ENST00000357475 VWA8A3KMH1 1905 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 PLXNA4Q9HCM2 1894 aa27.28■■□□□ 1.96
SSBP3-202ENST00000357475 NOL4O94818 638 aa27.27■■□□□ 1.96
SSBP3-202ENST00000357475 WDR72Q3MJ13 1102 aa27.27■■□□□ 1.96
SSBP3-202ENST00000357475 SCARA5Q6ZMJ2 495 aa27.27■■□□□ 1.96
SSBP3-202ENST00000357475 CLP1Q92989 425 aaKnown RBP27.27■■□□□ 1.96
SSBP3-202ENST00000357475 PCMTD1Q96MG8 357 aaPredicted RBP27.27■■□□□ 1.96
SSBP3-202ENST00000357475 ZNF560Q96MR9 790 aa27.27■■□□□ 1.96
SSBP3-202ENST00000357475 R3HCC1Q9Y3T6 440 aaKnown RBP27.27■■□□□ 1.96
SSBP3-202ENST00000357475 PCDHA11Q9Y5I1 949 aa27.27■■□□□ 1.96
SSBP3-202ENST00000357475 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.27■■□□□ 1.96
SSBP3-202ENST00000357475 KPNA7A9QM74 516 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 ADCY5O95622 1261 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 STAU1O95793 577 aaKnown RBP27.26■■□□□ 1.96
SSBP3-202ENST00000357475 LAG3P18627 525 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 ATICP31939 592 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 ALDH7A1P49419 539 aaKnown RBP27.26■■□□□ 1.96
SSBP3-202ENST00000357475 AARSP49588 968 aaKnown RBP eCLIP27.26■■□□□ 1.964e-6■■■■■ 36.2
SSBP3-202ENST00000357475 RRAGAQ7L523 313 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 ZNF558Q96NG5 402 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 C17orf80Q9BSJ5 609 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 VN1R3Q9BXE9 311 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 SDCBP2Q9H190 292 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 VRTNQ9H8Y1 702 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 SNX9Q9Y5X1 595 aa27.26■■□□□ 1.96
SSBP3-202ENST00000357475 A0A1W2PQC6 194 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 TMEM189-UBE2V1I3L0A0 370 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 PNPLA4P41247 253 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 ASPAP45381 313 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 RAP1GAPP47736 663 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 MYO1EQ12965 1108 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 SV2CQ496J9 727 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 WDR44Q5JSH3 913 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 SLC39A11Q8N1S5 342 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 NT5C1BQ96P26 610 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 COLEC11Q9BWP8 271 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 GPR62Q9BZJ7 368 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 GANQ9H2C0 597 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 SMYD3Q9H7B4 428 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 ADAM28Q9UKQ2 775 aa27.26■■□□□ 1.95
SSBP3-202ENST00000357475 COLQQ9Y215 455 aaPredicted RBP27.26■■□□□ 1.95
SSBP3-202ENST00000357475 CDH23Q9H251 3354 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 TADA2AO75478 443 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 MRE11P49959 708 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 ZNF667Q5HYK9 610 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 KLHDC7AQ5VTJ3 777 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 VSTM4Q8IW00 320 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 TAF4BQ92750 862 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 IGSF21Q96ID5 467 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 IMPG2Q9BZV3 1241 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 NKX2-4Q9H2Z4 354 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 APEX2Q9UBZ4 518 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 MTUS1Q9ULD2 1270 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 FHOD1Q9Y613 1164 aa27.25■■□□□ 1.95
SSBP3-202ENST00000357475 CDH8P55286 799 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 TAS1R1Q7RTX1 841 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 PPM1KQ8N3J5 372 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 B3GALT6Q96L58 329 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 SENP8Q96LD8 212 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 KREMEN1Q96MU8 473 aa27.24■■□□□ 1.95
SSBP3-202ENST00000357475 UBE2TQ9NPD8 197 aaPredicted RBP27.24■■□□□ 1.95
SSBP3-202ENST00000357475 TIMM13Q9Y5L4 95 aaPredicted RBP27.24■■□□□ 1.95
SSBP3-202ENST00000357475 TPM3P06753 285 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 TAP1Q03518 808 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 SOWAHAQ2M3V2 549 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 IQCEQ6IPM2 695 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 CCDC150Q8NCX0 1101 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 MRFAP1L1Q96HT8 127 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 NIF3L1Q9GZT8 377 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 PLCB1Q9NQ66 1216 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 GDAP2Q9NXN4 497 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 L1RE1Q9UN81 338 aa27.23■■□□□ 1.95
SSBP3-202ENST00000357475 RNF225M0QZC1 329 aaPredicted RBP27.22■■□□□ 1.95
SSBP3-202ENST00000357475 CYB561D2O14569 222 aa27.22■■□□□ 1.95
SSBP3-202ENST00000357475 EFEMP2O95967 443 aa27.22■■□□□ 1.95
SSBP3-202ENST00000357475 WEE2P0C1S8 567 aa27.22■■□□□ 1.95
SSBP3-202ENST00000357475 DSTYKQ6XUX3 929 aa27.22■■□□□ 1.95
SSBP3-202ENST00000357475 MMS19Q96T76 1030 aa27.22■■□□□ 1.95
SSBP3-202ENST00000357475 UCHL3P15374 230 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 CTNNB1P35222 781 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 TNNC1P63316 161 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 CUL2Q13617 745 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 FUT10Q6P4F1 479 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 KLHL23Q8NBE8 558 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 SUSD3Q96L08 255 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 MRPL45Q9BRJ2 306 aaKnown RBP27.21■■□□□ 1.95
SSBP3-202ENST00000357475 NAA15Q9BXJ9 866 aaKnown RBP27.21■■□□□ 1.95
SSBP3-202ENST00000357475 BCO2Q9BYV7 579 aa27.21■■□□□ 1.95
SSBP3-202ENST00000357475 SPG21Q9NZD8 308 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms