RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 DEF6Q9H4E7 631 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 GOLGA2P5Q9HBQ8 144 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 ACP6Q9NPH0 428 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 STAU1O95793 577 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CXCL10P02778 98 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CLTBP09497 229 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CCDC172P0C7W6 258 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 TNNT1P13805 278 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CAPN2P17655 700 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 WDR72Q3MJ13 1102 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF667Q5HYK9 610 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 DNTTIP2Q5QJE6 756 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 SCARA5Q6ZMJ2 495 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 FTHL17Q9BXU8 183 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 RSAD1Q9HA92 442 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 NXF1Q9UBU9 619 aaKnown RBP19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 CNTN6Q9UQ52 1028 aa19.46■□□□□ 0.71
SMARCD3-202ENST00000356800 PIRO00625 290 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 AKR1B10O60218 316 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 CYP3A5P20815 502 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 SCNN1GP51170 649 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 CYP27A1Q02318 531 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 GFPT1Q06210 699 aaPredicted RBP19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 SPA17Q15506 151 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 UBE2Q1Q7Z7E8 422 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 SLC47A2Q86VL8 602 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 SLC20A1Q8WUM9 679 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 SEPT8Q92599 483 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 PGBD4Q96DM1 585 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 VWCEQ96DN2 955 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 BCO2Q9BYV7 579 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 ALPK3Q96L96 1907 aa19.45■□□□□ 0.7
SMARCD3-202ENST00000356800 MICAL3Q7RTP6 2002 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 A0A087X0T9 212 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 ENPP3O14638 875 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 XPOTO43592 962 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 CALCAP01258 141 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 WEE2P0C1S8 567 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 FAM228BP0C875 321 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 KRT5P13647 590 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 EN2P19622 333 aaPredicted RBP19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 NOP9Q86U38 636 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 EPS8L1Q8TE68 723 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 RPS6KC1Q96S38 1066 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 SDCBP2Q9H190 292 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 ADAMTS1Q9UHI8 967 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 NOCTQ9UK39 431 aaKnown RBP19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 PCDHB4Q9Y5E5 795 aa19.44■□□□□ 0.7
SMARCD3-202ENST00000356800 TTC3P53804 2025 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 LRPAP1P30533 357 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 RAP1GAPP47736 663 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 SLC18A3Q16572 532 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 LRRC52Q8N7C0 313 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 LNX1Q8TBB1 728 aaPredicted RBP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 FAXDC2Q96IV6 333 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 SMYD3Q9H7B4 428 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 CISHQ9NSE2 258 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 CACNG4Q9UBN1 327 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 NENFQ9UMX5 172 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 DDX3XO00571 662 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 INPPL1O15357 1258 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 PARNO95453 639 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 EOMESO95936 686 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 THP07101 528 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 CHRNB2P17787 502 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 CD58P19256 250 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 ARHGAP25P42331 645 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 ZNF132P52740 706 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 CDH8P55286 799 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 ETF1P62495 437 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 TMEM270Q6UE05 265 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 SLC30A5Q8TAD4 765 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 APBB2Q92870 758 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 UBN1Q9NPG3 1134 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 TFR2Q9UP52 801 aa19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 R3HCC1Q9Y3T6 440 aaKnown RBP19.43■□□□□ 0.7
SMARCD3-202ENST00000356800 TRIM43BA6NCK2 446 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 SPTLC1O15269 473 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 CYP11B1P15538 503 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 ITGB8P26012 769 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 MYO1EQ12965 1108 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 ARHGAP29Q52LW3 1261 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 CLLU1OSQ5K130 101 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 DEFB128Q7Z7B8 93 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 RBBP8NLQ8NC74 664 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 DDX1Q92499 740 aaKnown RBP19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 TRIM43Q96BQ3 446 aaPredicted RBP19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 LZTFL1Q9NQ48 299 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
SMARCD3-202ENST00000356800 RCCD1A6NED2 376 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 ABL1P00519 1130 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 POMCP01189 267 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 VAV2P52735 878 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 BMS1Q14692 1282 aaKnown RBP19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 VPS36Q86VN1 386 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 PALB2Q86YC2 1186 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms