RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DNAAF5Q86Y56 855 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 PXYLP1Q8TE99 480 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 DNAJB3Q8WWF6 145 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 CARD9Q9H257 536 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 LHX5Q9H2C1 402 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 MCM3P25205 808 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 TNFRSF8P28908 595 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 TAF3Q5VWG9 929 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 TMEM270Q6UE05 265 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 PEX26Q7Z412 305 aa18.39■□□□□ 0.53
VPS13B-201ENST00000355155 RARBP10826 455 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 CYP3A5P20815 502 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 MAP2K2P36507 400 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 RBP5P82980 135 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 SERINC5Q86VE9 423 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 LRRC52Q8N7C0 313 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 C7orf31Q8N865 590 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 SRRDQ9UH36 339 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 LIMS2Q7Z4I7 341 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 DAAM2Q86T65 1068 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 CDR2LQ86X02 465 aaPredicted RBP18.38■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF606Q8WXB4 792 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 SELENOOQ9BVL4 669 aa18.38■□□□□ 0.53
VPS13B-201ENST00000355155 CELF4Q9BZC1 486 aaKnown RBP18.38■□□□□ 0.53
VPS13B-201ENST00000355155 TCRBV5S1A1TA0A578 114 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 TMCO5BA8MYB1 307 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 NPTXRO95502 500 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 P4HA1P13674 534 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 CLCN6P51797 869 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 PLEKHA7Q6IQ23 1121 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 USP38Q8NB14 1042 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 OSMRQ99650 979 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 SEPT11Q9NVA2 429 aaKnown RBP18.37■□□□□ 0.53
VPS13B-201ENST00000355155 CSDE1O75534 798 aaKnown RBP18.37■□□□□ 0.53
VPS13B-201ENST00000355155 FAM163BP0C2L3 166 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 ABCB4P21439 1286 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 HOXD10P28358 340 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 MRPS6P82932 125 aaKnown RBP18.37■□□□□ 0.53
VPS13B-201ENST00000355155 WHAMMQ8TF30 809 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 TMEM40Q8WWA1 233 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 TRAIPQ9BWF2 469 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
VPS13B-201ENST00000355155 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
VPS13B-201ENST00000355155 CILPO75339 1184 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 CABYRO75952 493 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 FAM26DQ5JW98 314 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF564Q8TBZ8 553 aaPredicted RBP18.36■□□□□ 0.53
VPS13B-201ENST00000355155 SCLT1Q96NL6 688 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 DPP3Q9NY33 737 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 KIAA1257Q9ULG3 409 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ALG6Q9Y672 507 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 AOC2O75106 756 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 MAN1A1P33908 653 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ELMO3Q96BJ8 720 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF653Q96CK0 615 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ZSWIM1Q9BR11 485 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■■■■ 194.3
VPS13B-201ENST00000355155 CAND2O75155 1236 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ITGB3P05106 788 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 C6orf222P0C671 652 aaPredicted RBP18.36■□□□□ 0.53
VPS13B-201ENST00000355155 MMP8P22894 467 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 SLC1A1P43005 524 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 PEX5P50542 639 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 APLP1P51693 650 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 PRMT2P55345 433 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 ZNF200P98182 395 aaPredicted RBP18.36■□□□□ 0.53
VPS13B-201ENST00000355155 FAM212AQ96EL1 285 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 CAPZA3Q96KX2 299 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■□□□ 14.5
VPS13B-201ENST00000355155 NUP85Q9BW27 656 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 EIF2AQ9BY44 585 aaKnown RBP18.36■□□□□ 0.53
VPS13B-201ENST00000355155 RNF186Q9NXI6 227 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 CTTNBP2NLQ9P2B4 639 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 SQORQ9Y6N5 450 aa18.36■□□□□ 0.53
VPS13B-201ENST00000355155 HMGCRP04035 888 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 CTNNA1P35221 906 aaKnown RBP18.35■□□□□ 0.53
VPS13B-201ENST00000355155 RAD23BP54727 409 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 OSTNP61366 133 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 NBPF20Q3BBV1 942 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 FAM43BQ6ZT52 329 aaPredicted RBP18.35■□□□□ 0.53
VPS13B-201ENST00000355155 CAGE1Q8TC20 777 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 CYFIP2Q96F07 1278 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 PNKPQ96T60 521 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
VPS13B-201ENST00000355155 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
VPS13B-201ENST00000355155 CCDC188H7C350 402 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 EIF1ADQ8N9N8 165 aaKnown RBP18.35■□□□□ 0.53
VPS13B-201ENST00000355155 PPP1R16BQ96T49 567 aa18.35■□□□□ 0.53
VPS13B-201ENST00000355155 MED7O43513 233 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 CLSTN1O94985 981 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 NSFP46459 744 aaKnown RBP18.34■□□□□ 0.53
VPS13B-201ENST00000355155 CCDC181Q5TID7 509 aa18.34■□□□□ 0.53
VPS13B-201ENST00000355155 CC2D1AQ6P1N0 951 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms