RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 LINC01553A4QN01 128 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 KPNA7A9QM74 516 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 PAX3P23760 479 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 PBX2P40425 430 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 NOP14P78316 857 aaKnown RBP26.05■■□□□ 1.76
HMGA2-201ENST00000354636 WDR44Q5JSH3 913 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 TMEM173Q86WV6 379 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-201ENST00000354636 HASPINQ8TF76 798 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 PBX4Q9BYU1 374 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 AAASQ9NRG9 546 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 NUB1Q9Y5A7 615 aa26.05■■□□□ 1.76
HMGA2-201ENST00000354636 CA3P07451 260 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 KLK7P49862 253 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 RAB30Q15771 203 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 WDR72Q3MJ13 1102 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 PRPF38BQ5VTL8 546 aaKnown RBP26.04■■□□□ 1.76
HMGA2-201ENST00000354636 TATDN2Q93075 761 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 SIX2Q9NPC8 291 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 GDAP2Q9NXN4 497 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 ADAM28Q9UKQ2 775 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 YBX2Q9Y2T7 364 aaKnown RBP26.04■■□□□ 1.76
HMGA2-201ENST00000354636 ARHGEF15O94989 841 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 MRE11P49959 708 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 ZNF75DP51815 510 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 LRMPQ12912 555 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 TIGD5Q53EQ6 642 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 ZNF667Q5HYK9 610 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 PHLDB3Q6NSJ2 640 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 SLC39A11Q8N1S5 342 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 FAXDC2Q96IV6 333 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 NT5C1BQ96P26 610 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 PLCB1Q9NQ66 1216 aa26.04■■□□□ 1.76
HMGA2-201ENST00000354636 TADA2AO75478 443 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 BRCC3P46736 316 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 APBA1Q02410 837 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 BCL7CQ8WUZ0 217 aaPredicted RBP26.03■■□□□ 1.76
HMGA2-201ENST00000354636 MRFAP1L1Q96HT8 127 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 IGSF21Q96ID5 467 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 LSM14BQ9BX40 385 aaKnown RBP26.03■■□□□ 1.76
HMGA2-201ENST00000354636 APEX2Q9UBZ4 518 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 PCDHB12Q9Y5F1 795 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 SNX9Q9Y5X1 595 aa26.03■■□□□ 1.76
HMGA2-201ENST00000354636 A0A1W2PPC1 479 aa26.02■■□□□ 1.76
HMGA2-201ENST00000354636 ARHGEF19Q8IW93 802 aa26.02■■□□□ 1.76
HMGA2-201ENST00000354636 SUSD3Q96L08 255 aa26.02■■□□□ 1.76
HMGA2-201ENST00000354636 PCMTD1Q96MG8 357 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-201ENST00000354636 NIF3L1Q9GZT8 377 aa26.02■■□□□ 1.76
HMGA2-201ENST00000354636 SPG21Q9NZD8 308 aa26.02■■□□□ 1.76
HMGA2-201ENST00000354636 NXF1Q9UBU9 619 aaKnown RBP26.02■■□□□ 1.76
HMGA2-201ENST00000354636 NOL4O94818 638 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 EFEMP2O95967 443 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 PPM1AP35813 382 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 BMPR1AP36894 532 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 KLHDC7AQ5VTJ3 777 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 SENP8Q96LD8 212 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 NKX2-4Q9H2Z4 354 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 FAM207AQ9NSI2 230 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-201ENST00000354636 POLIQ9UNA4 740 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 RWDD3Q9Y3V2 267 aa26.01■■□□□ 1.75
HMGA2-201ENST00000354636 M0QZQ0 153 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 ASPAP45381 313 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 TNNC1P63316 161 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 FUT10Q6P4F1 479 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 DSTYKQ6XUX3 929 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 PPM1KQ8N3J5 372 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 GPR62Q9BZJ7 368 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 GANQ9H2C0 597 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 NLRC5Q86WI3 1866 aa26■■□□□ 1.75
HMGA2-201ENST00000354636 SF3B1O75533 1304 aaKnown RBP eCLIP25.99■■□□□ 1.75
HMGA2-201ENST00000354636 ITIH6Q6UXX5 1313 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 I3L4J1 428 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 CYB561D2O14569 222 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 EPHB6O15197 1021 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 TRAPPC3O43617 180 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 ADCY5O95622 1261 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 P4HA1P13674 534 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 CTNNB1P35222 781 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 SMAD3P84022 425 aaKnown RBP25.99■■□□□ 1.75
HMGA2-201ENST00000354636 GCNT1Q02742 428 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 TAP1Q03518 808 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 GJB7Q6PEY0 223 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 DPH6Q7L8W6 267 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 LIMS2Q7Z4I7 341 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 VSTM4Q8IW00 320 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 NEK11Q8NG66 645 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 TMEM169Q96HH4 297 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 C17orf80Q9BSJ5 609 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 BCO2Q9BYV7 579 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 UBE2TQ9NPD8 197 aaPredicted RBP25.99■■□□□ 1.75
HMGA2-201ENST00000354636 MTUS1Q9ULD2 1270 aa25.99■■□□□ 1.75
HMGA2-201ENST00000354636 UCHL3P15374 230 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 CUL2Q13617 745 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 SOWAHAQ2M3V2 549 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 PPP2R2DQ66LE6 453 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 RRAGAQ7L523 313 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 SPRED2Q7Z698 418 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 RNF168Q8IYW5 571 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-201ENST00000354636 SAMD11Q96NU1 681 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 MMS19Q96T76 1030 aa25.98■■□□□ 1.75
HMGA2-201ENST00000354636 PLVAPQ9BX97 442 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms