RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 TRAPPC3O43617 180 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 CLSTN1O94985 981 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 CA3P07451 260 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 P4HA1P13674 534 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 IGFBP6P24592 240 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 PPM1AP35813 382 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 BMPR1AP36894 532 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 PBX1P40424 430 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 PBX3P40426 434 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 AARSP49588 968 aaKnown RBP eCLIP21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 SPOPLQ6IQ16 392 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 SLC39A11Q8N1S5 342 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 IGSF21Q96ID5 467 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 APOBEC3GQ9HC16 384 aaKnown RBP21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 MARCH5Q9NX47 278 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 SPG21Q9NZD8 308 aa21.55■■□□□ 1.04
TNFRSF25-203ENST00000351959 F8W810 466 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 ITGB1P05556 798 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 ZNF75DP51815 510 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 LRMPQ12912 555 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 TIGD5Q53EQ6 642 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 PHLDB3Q6NSJ2 640 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 DSTYKQ6XUX3 929 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 HASPINQ8TF76 798 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 TATDN2Q93075 761 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 MRFAP1L1Q96HT8 127 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 SENP8Q96LD8 212 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 LSM14BQ9BX40 385 aaKnown RBP21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 NXF1Q9UBU9 619 aaKnown RBP21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 APEX2Q9UBZ4 518 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 YBX2Q9Y2T7 364 aaKnown RBP21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 SNX9Q9Y5X1 595 aa21.54■■□□□ 1.04
TNFRSF25-203ENST00000351959 TNRC18O15417 2968 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 PBX2P40425 430 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 BRCC3P46736 316 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 TNNC1P63316 161 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 ELAVL2Q12926 359 aaKnown RBP21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 KLHDC7AQ5VTJ3 777 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 DPY19L2P1Q6NXN4 242 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 DPH6Q7L8W6 267 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 ELMO3Q96BJ8 720 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 TMEM169Q96HH4 297 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 SUSD3Q96L08 255 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 FAM81BQ96LP2 452 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 SAMD11Q96NU1 681 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 PLVAPQ9BX97 442 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 NIF3L1Q9GZT8 377 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 SIX2Q9NPC8 291 aa21.53■■□□□ 1.04
TNFRSF25-203ENST00000351959 ARHGEF37A1IGU5 675 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 M0QZQ0 153 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 CYB561D2O14569 222 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 HUS1O60921 280 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 FAM163BP0C2L3 166 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 KLK7P49862 253 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 TMEM173Q86WV6 379 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 PPM1KQ8N3J5 372 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 NEK11Q8NG66 645 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 TGS1Q96RS0 853 aaKnown RBP21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 MMS19Q96T76 1030 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 FAM207AQ9NSI2 230 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 COLQQ9Y215 455 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 DAAM1Q9Y4D1 1078 aa21.52■■□□□ 1.04
TNFRSF25-203ENST00000351959 SF3B1O75533 1304 aaKnown RBP eCLIP21.52■■□□□ 1.03
TNFRSF25-203ENST00000351959 ADCY5O95622 1261 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 RB1P06400 928 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 TBXAS1P24557 533 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 PLCB3Q01970 1234 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 GCNT1Q02742 428 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 TAP1Q03518 808 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 KRT17Q04695 432 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 PRPF38BQ5VTL8 546 aaKnown RBP21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 FUT10Q6P4F1 479 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 TOP6BLQ8N6T0 577 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 BCL7CQ8WUZ0 217 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 NUP58Q9BVL2 599 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 CYP3A43Q9HB55 503 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 UBE2TQ9NPD8 197 aaPredicted RBP21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 STK39Q9UEW8 545 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 FBXL5Q9UKA1 691 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 POLIQ9UNA4 740 aa21.51■■□□□ 1.03
TNFRSF25-203ENST00000351959 C5orf67F2Z3F1 127 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 FGF18O76093 207 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 ARHGEF15O94989 841 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 EFEMP2O95967 443 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 UCHL3P15374 230 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 RFX1P22670 979 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 CTNNB1P35222 781 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 ASPAP45381 313 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 MFAP3P55082 362 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 ERVK-21P61565 698 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 APBA1Q02410 837 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 CUL2Q13617 745 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 LRIT3Q3SXY7 679 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 RRAGAQ7L523 313 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 ENOSF1Q7L5Y1 443 aa21.5■■□□□ 1.03
TNFRSF25-203ENST00000351959 LIMS2Q7Z4I7 341 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms