RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 DAB2IPQ5VWQ8 1189 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 FAM160B1Q5W0V3 765 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 RIOX2Q8IUF8 465 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 WDR49Q8IV35 697 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 CCDC50Q8IVM0 306 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 UHMK1Q8TAS1 419 aaKnown RBP23.52■■□□□ 1.36
UPF3A-201ENST00000351487 TRAIPQ9BWF2 469 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 IMPG2Q9BZV3 1241 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 PARVAQ9NVD7 372 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 PAPPA2Q9BXP8 1791 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 ASS1P00966 412 aaKnown RBP23.51■■□□□ 1.35
UPF3A-201ENST00000351487 ATF2P15336 505 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 GKAP1Q5VSY0 366 aaPredicted RBP23.51■■□□□ 1.35
UPF3A-201ENST00000351487 CACNA2D3Q8IZS8 1091 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 KAT2BQ92831 832 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 OSBPL8Q9BZF1 889 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 TLR3O15455 904 aaKnown RBP23.51■■□□□ 1.35
UPF3A-201ENST00000351487 MMP8P22894 467 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 CHKAP35790 457 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 STAT5BP51692 787 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 EFNA5P52803 228 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 ITGA8P53708 1063 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 NEDD9Q14511 834 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 TAOK1Q7L7X3 1001 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 FEZF2Q8TBJ5 459 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 ZNF606Q8WXB4 792 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 CCDC114Q96M63 670 aa23.51■■□□□ 1.35
UPF3A-201ENST00000351487 DDX23Q9BUQ8 820 aaKnown RBP23.51■■□□□ 1.35
UPF3A-201ENST00000351487 POLR2AP24928 1970 aaKnown RBP23.5■■□□□ 1.35
UPF3A-201ENST00000351487 SLCO1A2P46721 670 aa23.5■■□□□ 1.35
UPF3A-201ENST00000351487 SERPINB12Q96P63 405 aa23.5■■□□□ 1.35
UPF3A-201ENST00000351487 CCDC113Q9H0I3 377 aa23.5■■□□□ 1.35
UPF3A-201ENST00000351487 GPRC5DQ9NZD1 345 aa23.5■■□□□ 1.35
UPF3A-201ENST00000351487 IP6K2Q9UHH9 426 aa23.5■■□□□ 1.35
UPF3A-201ENST00000351487 MSCO60682 206 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 TTC4O95801 387 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 TGFB3P10600 412 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 MKRN4PQ13434 485 aaPredicted RBP23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CPLX4Q7Z7G2 160 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CABS1Q96KC9 395 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 BTBD7Q9P203 1132 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 SNCAIPQ9Y6H5 919 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CAPN7Q9Y6W3 813 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 TOM1L1O75674 476 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 PLCB4Q15147 1175 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 SEZ6Q53EL9 994 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 TREML2Q5T2D2 321 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 RNF187Q5TA31 235 aaPredicted RBP23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CDCA2Q69YH5 1023 aaPredicted RBP23.49■■□□□ 1.35
UPF3A-201ENST00000351487 SMYD5Q6GMV2 418 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CNPY4Q8N129 248 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 CCDC89Q8N998 374 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 BBOF1Q8ND07 529 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 HEMGNQ9BXL5 484 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 MRPL4Q9BYD3 311 aaKnown RBP23.49■■□□□ 1.35
UPF3A-201ENST00000351487 MTFR1LQ9H019 292 aa23.49■■□□□ 1.35
UPF3A-201ENST00000351487 INTS9Q9NV88 658 aaKnown RBP23.49■■□□□ 1.35
UPF3A-201ENST00000351487 SOWAHBA6NEL2 793 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 TTLL13PA6NNM8 815 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 LSM8O95777 96 aaKnown RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 HARSP12081 509 aaKnown RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 METTL7BQ6UX53 244 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 FAM167AQ96KS9 214 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 SCLT1Q96NL6 688 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 OTOFQ9HC10 1997 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 USP2O75604 605 aaPredicted RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 ACSL3O95573 720 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 TCF7P36402 384 aaPredicted RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 ADCY8P40145 1251 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 TNFSF9P41273 254 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 ACTN3Q08043 901 aaPredicted RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 CCDC121Q6ZUS5 278 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 RELL1Q8IUW5 271 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 PRPF31Q8WWY3 499 aaKnown RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 SEPT1Q8WYJ6 367 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
UPF3A-201ENST00000351487 ANAPC5Q9UJX4 755 aa23.48■■□□□ 1.35
UPF3A-201ENST00000351487 TCRBV5S1A1TA0A578 114 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 TCEA3O75764 348 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 CST3P01034 146 aaPredicted RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 CALB1P05937 261 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 SSTR3P32745 418 aaPredicted RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 TRIP13Q15645 432 aaPredicted RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 LONRF1Q17RB8 773 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 SCARA3Q6AZY7 606 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 ANKS1BQ7Z6G8 1248 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 EXOC3L1Q86VI1 746 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 BBXQ8WY36 941 aaPredicted RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 P3H4Q92791 437 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 TMEM191CA6NGB0 347 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 GAS2O43903 313 aaKnown RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 TMEM191BP0C7N4 346 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 CD58P19256 250 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 VGLL4Q14135 290 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 IER5Q5VY09 327 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 ZNF365Q70YC5 407 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 RBM41Q96IZ5 413 aaKnown RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 ACTR5Q9H9F9 607 aaPredicted RBP23.47■■□□□ 1.35
UPF3A-201ENST00000351487 USTQ9Y2C2 406 aa23.47■■□□□ 1.35
UPF3A-201ENST00000351487 ASAP2O43150 1006 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms