RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 BTNL10A8MVZ5 291 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ABLIM1O14639 778 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 B4GALT5O43286 388 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 FAM189A1O60320 539 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CSDE1O75534 798 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 VNN1O95497 513 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 GNRH1P01148 92 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 HLA-DRAP01903 254 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CHRNB2P17787 502 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 MFAP3P55082 362 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 TLR1Q15399 786 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 TAF1CQ15572 869 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 MAPK6Q16659 721 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ZACNQ401N2 412 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 DUSP28Q4G0W2 176 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF484Q5JVG2 852 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ZPBP2Q6X784 338 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 NOP9Q86U38 636 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 SLC47A2Q86VL8 602 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CDR2LQ86X02 465 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 CREG2Q8IUH2 290 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 RPUSD2Q8IZ73 545 aaKnown RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 OR6J1Q8NGC5 347 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 OR5B17Q8NGF7 314 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 SHC3Q92529 594 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 OSBPL9Q96SU4 736 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 JPH2Q9BR39 696 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 TCHPQ9BT92 498 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ABHD16BQ9H3Z7 469 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 FLRT1Q9NZU1 646 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 PACSIN2Q9UNF0 486 aaPredicted RBP9.92□□□□□ -0.82
ATG4A-202ENST00000345734 PCDHGC5Q9Y5F6 944 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ZSWIM8A7E2V4 1837 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF236Q9UL36 1845 aa9.92□□□□□ -0.82
ATG4A-202ENST00000345734 INO80B-WBP1J3KQ70 363 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 TOM1L1O75674 476 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 LDHAP00338 332 aaKnown RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 CALCAP01258 141 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 MMP3P08254 477 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 IQCF3P0C7M6 154 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 NOP2P46087 812 aaKnown RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 DNA2P51530 1060 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 MBTD1Q05BQ5 628 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 BIRC3Q13489 604 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PTPROQ16827 1216 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 SPOPLQ6IQ16 392 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 SAPCD2Q86UD0 394 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 FMNL3Q8IVF7 1028 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ITPKCQ96DU7 683 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PCDHB18PQ96TA0 734 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 INO80BQ9C086 356 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 C2orf40Q9H1Z8 148 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 SMARCAL1Q9NZC9 954 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 EHD2Q9NZN4 543 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 TRIP12Q14669 1992 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 MANSC4A6NHS7 340 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ACKR2O00590 384 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 RHOXF2BP0C7M4 288 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ABCB4P21439 1286 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PIK3CAP42336 1068 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PTENP60484 403 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 TFDP1Q14186 410 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 MEI1Q5TIA1 1274 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 EEF1DP3Q658K8 133 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 RGMBQ6NW40 437 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 BRSK2Q8IWQ3 736 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 LINC01465Q8N7H1 131 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 KDF1Q8NAX2 398 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 CAGE1Q8TC20 777 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PPP1R13LQ8WUF5 828 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 LENG1Q96BZ8 264 aaPredicted RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ARHGEF26Q96DR7 871 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 RHOXF2Q9BQY4 288 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 PARD6BQ9BYG5 372 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 FZD8Q9H461 694 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 IFT122Q9HBG6 1241 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 NOCTQ9UK39 431 aaKnown RBP9.91□□□□□ -0.82
ATG4A-202ENST00000345734 INTUQ9ULD6 942 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
ATG4A-202ENST00000345734 ATP8B3O60423 1300 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 VTNP04004 478 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 PRLRP16471 622 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 PROZP22891 400 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 MCL1Q07820 350 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 CCL14Q16627 93 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 FAM26DQ5JW98 314 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 COX20Q5RI15 118 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 C16orf46Q6P387 395 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 MTHFD1LQ6UB35 978 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 LRRC57Q8N9N7 239 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 MS4A14Q96JA4 679 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 PNKPQ96T60 521 aa9.9□□□□□ -0.82
ATG4A-202ENST00000345734 C2orf49Q9BVC5 232 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms