RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DEPTORQ8TB45 409 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ZBTB45Q96K62 511 aaPredicted RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 KDM4CQ9H3R0 1056 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 PCDHB4Q9Y5E5 795 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ADGRA2Q96PE1 1338 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ANK1P16157 1881 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 A0A0B4J269 797 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ICAM3P32942 547 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ARL2P36404 184 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 GMPSP49915 693 aaPredicted RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 TAS2R40P59535 323 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 ITIH4Q14624 930 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 TRIP13Q15645 432 aaPredicted RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 CCDC38Q502W7 563 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CATSPERGQ6ZRH7 1159 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 LRRC34Q8IZ02 419 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 RBBP8NLQ8NC74 664 aaPredicted RBP15.47■□□□□ 0.07
TDP2-201ENST00000341060 EXD1Q8NHP7 514 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 MSTO1Q9BUK6 570 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CCDC113Q9H0I3 377 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 ANKFY1Q9P2R3 1169 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 CNTNAP2Q9UHC6 1331 aa15.47■□□□□ 0.07
TDP2-201ENST00000341060 TCEA3O75764 348 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 RASSF9O75901 435 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 GHRP10912 638 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 ADCY8P40145 1251 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 ZBTB41Q5SVQ8 909 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 CCDC89Q8N998 374 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 BBOF1Q8ND07 529 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 IPO4Q8TEX9 1081 aaKnown RBP15.46■□□□□ 0.07
TDP2-201ENST00000341060 ARHGEF2Q92974 986 aaKnown RBP15.46■□□□□ 0.07
TDP2-201ENST00000341060 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 HEMGNQ9BXL5 484 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 OSBPL8Q9BZF1 889 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 FBXO40Q9UH90 709 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 ANAPC5Q9UJX4 755 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 A0A0G2JMZ2 1700 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 LRRC37A2A6NM11 1700 aa15.46■□□□□ 0.07
TDP2-201ENST00000341060 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.06
TDP2-201ENST00000341060 THAP12O43422 761 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 SCTRP47872 440 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 STXBP2Q15833 593 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 RELL1Q8IUW5 271 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 DNERQ8NFT8 737 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 TARS2Q9BW92 718 aaKnown RBP15.46■□□□□ 0.06
TDP2-201ENST00000341060 NIFKQ9BYG3 293 aaKnown RBP15.46■□□□□ 0.06
TDP2-201ENST00000341060 NSRP1Q9H0G5 558 aaKnown RBP15.46■□□□□ 0.06
TDP2-201ENST00000341060 SAMD15Q9P1V8 674 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 NUB1Q9Y5A7 615 aa15.46■□□□□ 0.06
TDP2-201ENST00000341060 IGKV6D-21A0A0A0MT36 114 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
TDP2-201ENST00000341060 EDN1P05305 212 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 KYNUQ16719 465 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 ZNF365Q70YC5 407 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 TMEM134Q9H6X4 195 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 PARVAQ9NVD7 372 aa15.45■□□□□ 0.06
TDP2-201ENST00000341060 IFNAR2P48551 515 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 ZNF132P52740 706 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 NCOA4Q13772 614 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 VSTM1Q6UX27 236 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 OR5B17Q8NGF7 314 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 FEZF2Q8TBJ5 459 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 SLC40A1Q9NP59 571 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 NINJ2Q9NZG7 142 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 FZD1Q9UP38 647 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 POLR2AP24928 1970 aaKnown RBP15.44■□□□□ 0.06
TDP2-201ENST00000341060 TMEM120BA0PK00 339 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 CCT8L1PA6NM43 557 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 VIMP08670 466 aaKnown RBP15.44■□□□□ 0.06
TDP2-201ENST00000341060 CD58P19256 250 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 KLRC2P26717 231 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 RFC5P40937 340 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 VPS41P49754 854 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 UBR7Q8N806 425 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 ZNF606Q8WXB4 792 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 KLC4Q9NSK0 619 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 DNAJC17Q9NVM6 304 aaKnown RBP15.44■□□□□ 0.06
TDP2-201ENST00000341060 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 CTNNAL1Q9UBT7 734 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 IP6K2Q9UHH9 426 aa15.44■□□□□ 0.06
TDP2-201ENST00000341060 MMP8P22894 467 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 SSTR3P32745 418 aaPredicted RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 LMNB2Q03252 620 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 FAM118BQ9BPY3 351 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 LGALS13Q9UHV8 139 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 USTQ9Y2C2 406 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 DNAJC8O75937 253 aaPredicted RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 CREB1P16220 341 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 GJC1P36383 396 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 AP3M2P53677 418 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 NFX1Q12986 1120 aaKnown RBP15.43■□□□□ 0.06
TDP2-201ENST00000341060 XRCC4Q13426 336 aa15.43■□□□□ 0.06
TDP2-201ENST00000341060 CAPSQ13938 189 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms