RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PKD1L2Q7Z442 2459 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 A0A1W2PRU2 124 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 MEFVO15553 781 aaPredicted RBP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 RPP40O75818 363 aaKnown RBP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 XRCC6P12956 609 aaKnown RBP eCLIP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 PSMA5P28066 241 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 TXKP42681 527 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 OSTNP61366 133 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 TNK2Q07912 1038 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 CALCRLQ16602 461 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 XKR4Q5GH76 650 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 CACNA2D4Q7Z3S7 1137 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 RALGPS2Q86X27 583 aaPredicted RBP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 ELMOD1Q8N336 334 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 C18orf25Q96B23 403 aaPredicted RBP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 MSANTD3Q96H12 275 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 LOXL4Q96JB6 756 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 DNAJC25Q9H1X3 360 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 AFF4Q9UHB7 1163 aaKnown RBP17.97■□□□□ 0.47
NECTIN1-202ENST00000340882 DMXL2Q8TDJ6 3036 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 DSPP15924 2871 aaKnown RBP17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 H7C4K7 107 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 SYN3O14994 580 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 MED24O75448 989 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 MPLP40238 635 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ACAP1Q15027 740 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ATF7IP2Q5U623 682 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 KDF1Q8NAX2 398 aaPredicted RBP17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 DEPTORQ8TB45 409 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 YIPF1Q9Y548 306 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ANK1P16157 1881 aa17.96■□□□□ 0.47
NECTIN1-202ENST00000340882 ABCA7Q8IZY2 2146 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 MYO16Q9Y6X6 1858 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 NAMPTP43490 491 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 SCRN1Q12765 414 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 FOXC1Q12948 553 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 RNF43Q68DV7 783 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 E2F7Q96AV8 911 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 MTMR9Q96QG7 549 aa17.95■□□□□ 0.46
NECTIN1-202ENST00000340882 DENND4CQ5VZ89 1909 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 OR4Q2P0C623 313 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 GRM5P41594 1212 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 NOVA1P51513 510 aaKnown RBP17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 C1orf228Q6PIY5 440 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 PADI6Q6TGC4 694 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 GAREM2Q75VX8 874 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 LEMD2Q8NC56 503 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 DDX12PQ92771 950 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 SUSD3Q96L08 255 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 PGLYRP2Q96PD5 576 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 GPR88Q9GZN0 384 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 CDT1Q9H211 546 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
NECTIN1-202ENST00000340882 ZNF638Q14966 1978 aaKnown RBP17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 KIAA1549LQ6ZVL6 1849 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CTDNEP1O95476 244 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 PRAMEF12O95522 483 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CCDC192P0DO97 292 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CPB1P15086 417 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CYP11B2P19099 503 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 ZNF280DQ6N043 979 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 BEST2Q8NFU1 509 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 ZC3H10Q96K80 434 aaKnown RBP17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 TNFSF13BQ9Y275 285 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 NUB1Q9Y5A7 615 aa17.93■□□□□ 0.46
NECTIN1-202ENST00000340882 THADAQ6YHU6 1953 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 SRRM3A6NNA2 597 aaPredicted RBP17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 C4orf47A7E2U8 309 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 ZNF252P-AS1Q0IIN9 211 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 PLK5Q496M5 336 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 SYNPOQ8N3V7 929 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 FAM200AQ8TCP9 573 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 EDEM2Q9BV94 578 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 DUSP15Q9H1R2 295 aaPredicted RBP17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 PTPRHQ9HD43 1115 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 TUFT1Q9NNX1 390 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 VPS45Q9NRW7 570 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 PCDHGA5Q9Y5G8 931 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 TIMM13Q9Y5L4 95 aaPredicted RBP17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 STK36Q9NRP7 1315 aa17.92■□□□□ 0.46
NECTIN1-202ENST00000340882 CCDC163A0A0D9SF12 145 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 DCLK1O15075 740 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 NEMFO60524 1076 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 KCNE1P15382 129 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 MCM4P33991 863 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 YARSP54577 528 aaKnown RBP17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 DUSP4Q13115 394 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 ARHGAP29Q52LW3 1261 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 FSTL4Q6MZW2 842 aa17.91■□□□□ 0.46
NECTIN1-202ENST00000340882 TTC9BQ8N6N2 239 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms