RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 RWDD3Q9Y3V2 267 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 SPTLC1O15269 473 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 GRAP2O75791 330 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ECEL1O95672 775 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CLTBP09497 229 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 SLC2A3P11169 496 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ARL4DP49703 201 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ZNF177Q13360 481 aaPredicted RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 UMODL1Q5DID0 1318 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 I3L4J1 428 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CXCL14O95715 111 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 TUFMP49411 452 aaKnown RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 HIRAP54198 1017 aaPredicted RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 CDH6P55285 790 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 STARD3Q14849 445 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ITPRIPL1Q6GPH6 555 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 LRRC43Q8N309 656 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 CFAP57Q96MR6 1250 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 MKNK1Q9BUB5 465 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CYTH3O43739 400 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ZFXP17010 805 aaPredicted RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
LIN54-201ENST00000340417 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 FAF2Q96CS3 445 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CHMP6Q96FZ7 201 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CARD6Q9BX69 1037 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 RBPJLQ9UBG7 517 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 SF3B1O75533 1304 aaKnown RBP eCLIP13.55□□□□□ -0.245e-6■■■■■ 102.5
LIN54-201ENST00000340417 ACRP10323 421 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 GTF2H1P32780 548 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 DPYDQ12882 1025 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 MTMR3Q13615 1198 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
LIN54-201ENST00000340417 ATP1A3P13637 1013 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 RPS6KA2Q15349 733 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 USP49Q70CQ1 688 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 UROC1Q96N76 676 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 AGPAT1Q99943 283 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 SLC25A13Q9UJS0 675 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 SLITRK3O94933 977 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 GIT2Q14161 759 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
LIN54-201ENST00000340417 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 WDR49Q8IV35 697 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 ARFGAP2Q8N6H7 521 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 MCUQ8NE86 351 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 CATSPERBQ9H7T0 1116 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 LAG3P18627 525 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 GPAT2Q6NUI2 795 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 GIPC2Q8TF65 315 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 SYT15Q9BQS2 421 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 TLR8Q9NR97 1041 aaKnown RBP13.54□□□□□ -0.24
LIN54-201ENST00000340417 F5H5T6 163 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 RECQL4O94761 1208 aa13.54□□□□□ -0.24
LIN54-201ENST00000340417 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
LIN54-201ENST00000340417 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
LIN54-201ENST00000340417 PABPC5Q96DU9 382 aaKnown RBP13.54□□□□□ -0.24
LIN54-201ENST00000340417 BRD2P25440 801 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 ORC1Q13415 861 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 IL31RAQ8NI17 732 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 ATRIPQ8WXE1 791 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 CNTNAP2Q9UHC6 1331 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 PPP1R12AO14974 1030 aaPredicted RBP13.53□□□□□ -0.24
LIN54-201ENST00000340417 INHBAP08476 426 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 ATICP31939 592 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 TLE2Q04725 743 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 EFEMP1Q12805 493 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 FAM8A1Q9UBU6 413 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 DAAM1Q9Y4D1 1078 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 EVX2Q03828 476 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 ATPAF2Q8N5M1 289 aa13.53□□□□□ -0.24
LIN54-201ENST00000340417 CDK5RAP1Q96SZ6 601 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms