RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PRR11Q96HE9 360 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-202ENST00000339570 NAF1Q96HR8 494 aaKnown RBP17.08■□□□□ 0.32
SCARB1-202ENST00000339570 F8VP50 259 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 BBS9Q3SYG4 887 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 BRDTQ58F21 947 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 WDR44Q5JSH3 913 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 DCUN1D2Q6PH85 259 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 PPP1R21Q6ZMI0 780 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 DDX1Q92499 740 aaKnown RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 TMEM109Q9BVC6 243 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 POLGP54098 1239 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 MUM1Q2TAK8 710 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 TKFCQ3LXA3 575 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 ZBTB41Q5SVQ8 909 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 CRELD2Q6UXH1 353 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 CHURC1Q8WUH1 139 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 MAK16Q9BXY0 300 aaKnown RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 FBXO6Q9NRD1 293 aaPredicted RBP17.07■□□□□ 0.32
SCARB1-202ENST00000339570 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 ZFP69BQ9UJL9 534 aa17.07■□□□□ 0.32
SCARB1-202ENST00000339570 MAPK13O15264 365 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TFDP1Q14186 410 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TNFAIP8L3Q5GJ75 292 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TTC17Q96AE7 1141 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TMEM8AQ9HCN3 771 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 GINM1Q9NU53 330 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TXLNGQ9NUQ3 528 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 ARMCX1Q9P291 453 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 IVNS1ABPQ9Y6Y0 642 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 PIK3R2O00459 728 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 RFX1P22670 979 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 GNA15P30679 374 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TUBP50607 506 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 MTERF2Q49AM1 385 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 RFWD2Q8NHY2 731 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 CCHCR1Q8TD31 782 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 GABBR1Q9UBS5 961 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-202ENST00000339570 KITP10721 976 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 ALDH3A1P30838 453 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 HADHBP55084 474 aaKnown RBP17.06■□□□□ 0.32
SCARB1-202ENST00000339570 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
SCARB1-202ENST00000339570 RIPK1Q13546 671 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 RAB3IPQ96QF0 476 aaPredicted RBP17.06■□□□□ 0.32
SCARB1-202ENST00000339570 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
SCARB1-202ENST00000339570 ADGRA3Q8IWK6 1321 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 HLA-DRAP01903 254 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 VPS72Q15906 364 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 LRRC6Q86X45 466 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 SLC17A7Q9P2U7 560 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 ASTN2O75129 1339 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-202ENST00000339570 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 LIG4P49917 911 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 NLRP9Q7RTR0 991 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 OTOAQ7RTW8 1153 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 TRABD2AQ86V40 505 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 RHPN2Q8IUC4 686 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 RHOT1Q8IXI2 618 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-202ENST00000339570 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 MARCOQ9UEW3 520 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-202ENST00000339570 PCSK1NQ9UHG2 260 aa17.05■□□□□ 0.32
SCARB1-202ENST00000339570 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 MAP3K13O43283 966 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 SLC26A4O43511 780 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 MMP14P50281 582 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 NLRP11P59045 1033 aaKnown RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 IRX4P78413 519 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 STAT4Q14765 748 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 MAPK6Q16659 721 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 LIN9Q5TKA1 542 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 SWSAP1Q6NVH7 229 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 ASRGL1Q7L266 308 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CFAP57Q96MR6 1250 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 DENND2DQ9H6A0 471 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 USH1CQ9Y6N9 552 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 F5H423 210 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CCNE2O96020 404 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-202ENST00000339570 MXRA7P84157 204 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
SCARB1-202ENST00000339570 PODNQ7Z5L7 613 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms