RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SLCO1A2P46721 670 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 APLP1P51693 650 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 QPCTQ16769 361 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 TTC31Q49AM3 519 aaPredicted RBP17.38■□□□□ 0.37
LITAF-201ENST00000339430 SGO2Q562F6 1265 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 SPDYCQ5MJ68 293 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 TLCD1Q96CP7 247 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 HERPUD2Q9BSE4 406 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 AZI2Q9H6S1 392 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
LITAF-201ENST00000339430 PCNTO95613 3336 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 TRAPPC3O43617 180 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 RTP1P59025 263 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 ZACNQ401N2 412 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 MORN1Q5T089 497 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 METTL7BQ6UX53 244 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 ENOSF1Q7L5Y1 443 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 CHST7Q9NS84 486 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 PARP2Q9UGN5 583 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 O00370 1275 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 VNN1O95497 513 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 ECEL1O95672 775 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 SNAI1O95863 264 aaPredicted RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 C4BPAP04003 597 aaKnown RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 KRT17Q04695 432 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 PSMD6Q15008 389 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 TRIP13Q15645 432 aaPredicted RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 SCARA3Q6AZY7 606 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 EPS8L3Q8TE67 593 aaKnown RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 COPS5Q92905 334 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 SELENOSQ9BQE4 189 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 TINF2Q9BSI4 451 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 TARS2Q9BW92 718 aaKnown RBP17.37■□□□□ 0.37
LITAF-201ENST00000339430 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 PCDHB2Q9Y5E7 798 aa17.37■□□□□ 0.37
LITAF-201ENST00000339430 GSTTP1A0A1W2PQM5 241 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
LITAF-201ENST00000339430 ATG7O95352 703 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 EDN1P05305 212 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 GLRA2P23416 452 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 NSFP46459 744 aaKnown RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 IFI35P80217 286 aaPredicted RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 IFT88Q13099 833 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 MAP2K5Q13163 448 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 RNF187Q5TA31 235 aaPredicted RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 TAPT1Q6NXT6 567 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 OTUD6BQ8N6M0 293 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 ART4Q93070 314 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 FAM118BQ9BPY3 351 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 SLC5A4Q9NY91 659 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 RBAKQ9NYW8 714 aaPredicted RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 UMODL1Q5DID0 1318 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 K7ERI5 159 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 MEFVO15553 781 aaPredicted RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 GJC1P36383 396 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 FNTAP49354 379 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 TMEM270Q6UE05 265 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 DHX37Q8IY37 1157 aaKnown RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 DEPTORQ8TB45 409 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 HEMGNQ9BXL5 484 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 LRRC19Q9H756 370 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 APOBEC3GQ9HC16 384 aaKnown RBP17.36■□□□□ 0.37
LITAF-201ENST00000339430 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 PCDHB4Q9Y5E5 795 aa17.36■□□□□ 0.37
LITAF-201ENST00000339430 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 FSCN2O14926 492 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 RGS16O15492 202 aaPredicted RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 RIPK2O43353 540 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 GJB6O95452 261 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 ALDH1A1P00352 501 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 OATP04181 439 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 SLC20A2Q08357 652 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 CCDC50Q8IVM0 306 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 C12orf50Q8NA57 414 aaPredicted RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 MSTO1Q9BUK6 570 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 DNAJC17Q9NVM6 304 aaKnown RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 ASIC3Q9UHC3 531 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 H0YCG3 227 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 CTGFP29279 349 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 GBP1P32455 592 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 TCF7P36402 384 aaPredicted RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 VPS41P49754 854 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 CALCOCO2Q13137 446 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 MICALCLQ6ZW33 695 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 DDX23Q9BUQ8 820 aaKnown RBP17.35■□□□□ 0.37
LITAF-201ENST00000339430 PLVAPQ9BX97 442 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 KIAA1586Q9HCI6 787 aa17.35■□□□□ 0.37
LITAF-201ENST00000339430 USTQ9Y2C2 406 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms