RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 EPC1Q9H2F5 836 aa17.06■□□□□ 0.32
LINC01116-202ENST00000339037 SH2B1Q9NRF2 756 aaPredicted RBP17.06■□□□□ 0.32
LINC01116-202ENST00000339037 MAFFQ9ULX9 164 aa17.06■□□□□ 0.32
LINC01116-202ENST00000339037 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
LINC01116-202ENST00000339037 SMG5Q9UPR3 1016 aaKnown RBP17.06■□□□□ 0.32
LINC01116-202ENST00000339037 ACACBO00763 2458 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 PSMC3P17980 439 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 PRPHP41219 470 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 SMTNP53814 917 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 RAD51AP2Q09MP3 1159 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 TWF1Q12792 350 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 FZD5Q13467 585 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 RSPO4Q2I0M5 234 aaPredicted RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 SEZ6Q53EL9 994 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 DTHD1Q6ZMT9 781 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 KCNK18Q7Z418 384 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 LEMD2Q8NC56 503 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 DDX12PQ92771 950 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 ZSCAN31Q96LW9 406 aaPredicted RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 NTPCRQ9BSD7 190 aaKnown RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 MMTAG2Q9BU76 263 aaKnown RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 FAM126AQ9BYI3 521 aaPredicted RBP17.05■□□□□ 0.32
LINC01116-202ENST00000339037 OCEL1Q9H607 264 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 CEP72Q9P209 647 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 TUBGCP4Q9UGJ1 667 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
LINC01116-202ENST00000339037 NRG2O14511 850 aaPredicted RBP17.04■□□□□ 0.32
LINC01116-202ENST00000339037 LILRB5O75023 590 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 MYL4P12829 197 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 PLS3P13797 630 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 MARCKSP29966 332 aaPredicted RBP17.04■□□□□ 0.32
LINC01116-202ENST00000339037 GDI1P31150 447 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 IL17AQ16552 155 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 SLC10A6Q3KNW5 377 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 ZPBP2Q6X784 338 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 MAP4K3Q8IVH8 894 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
LINC01116-202ENST00000339037 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 ZSWIM3Q96MP5 696 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 CHRDQ9H2X0 955 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 CITO14578 2027 aa17.04■□□□□ 0.32
LINC01116-202ENST00000339037 CLDN3O15551 220 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 CXCL8P10145 99 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
LINC01116-202ENST00000339037 VIPR2P41587 438 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 EPHA5P54756 1037 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 YWHAHQ04917 246 aaPredicted RBP17.03■□□□□ 0.32
LINC01116-202ENST00000339037 MCL1Q07820 350 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 VITQ6UXI7 678 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 ZNF687Q8N1G0 1237 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
LINC01116-202ENST00000339037 FAM3CQ92520 227 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 IER2Q9BTL4 223 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 ZNF334Q9HCZ1 680 aaPredicted RBP17.03■□□□□ 0.32
LINC01116-202ENST00000339037 TRPV5Q9NQA5 729 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 YIPF1Q9Y548 306 aa17.03■□□□□ 0.32
LINC01116-202ENST00000339037 PDCD11Q14690 1871 aaKnown RBP17.02■□□□□ 0.32
LINC01116-202ENST00000339037 M0QZQ0 153 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 ZNF263O14978 683 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 MOSPD3O75425 235 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 OAZ2O95190 189 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 CLTAP09496 248 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 GJA1P17302 382 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 SDHBP21912 280 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC01116-202ENST00000339037 NRLP54845 237 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 OXCT2Q9BYC2 517 aaPredicted RBP17.02■□□□□ 0.32
LINC01116-202ENST00000339037 PLEKHA5Q9HAU0 1116 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 TRPV4Q9HBA0 871 aa17.02■□□□□ 0.32
LINC01116-202ENST00000339037 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.02■□□□□ 0.32
LINC01116-202ENST00000339037 CHD8Q9HCK8 2581 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 CACNA1BQ00975 2339 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 LMNB2Q03252 620 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 PPP2R3AQ06190 1150 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 SPAG1Q07617 926 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 PLD1Q13393 1074 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 TEAD2Q15562 447 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 MAMSTRQ6ZN01 415 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 USP37Q86T82 979 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
LINC01116-202ENST00000339037 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 SHKBP1Q8TBC3 707 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 BICD1Q96G01 975 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 PGLYRP2Q96PD5 576 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 GPR88Q9GZN0 384 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
LINC01116-202ENST00000339037 KCND2Q9NZV8 630 aa17.01■□□□□ 0.31
LINC01116-202ENST00000339037 GMEB2Q9UKD1 530 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms